Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1159 ATGGCGAAGGGAGGGCAATGCTTTGAGAAGGTTCGGAGATGCATTCGGACGGTTTTCTTCGTGGCAGCGTTGGTGGCGTCGCTGCTTGTGACGTCGCTGCCGGTGGTGGTGGCGGTGATGGACGTGCTTGTGCCGTGCATTTTGATATCGAGCTTCACGTGTGTTAGGTGTTACAGCTTCAAGGAACATTTGCTAAAATACGATTTCAAAAGCTCCTTGGCGGATATTCCGATGGTTTCAGTCATAAGATCGCTCATCATTATATGTGTTTATTCCATTTGTGATGGCCCTGCTCTCTCACATGGTCCTTATTTAGGAACTGTAACTGTGTCTTCCTTGGTCTCAATTGTTCTCCTTTCAGTCAAAGCTTGTGTTTTCTCTGTGAATTCCCAGATTGAAGCAGAAGCTTCAGTTTCCATCACAAGAAAGAAACTACATCTGAAGAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCACTTGGGCATATTGTAGTCGCCTATAGAACCAGCTGCAGAGCAAGGAGAAAGCTCCTGTTTCACCGAGTTGACCCTGAAGCTGTTCTTTCGTGCAAAAGTGTTTTCTCAAGATATCAGAAGGTCCCACGTTCTCCTGTTCCTTCTGGGGGGAGAACCCCAAAAAGTGACAGTGAAATGAGGCGGAGACCTTTTGGAGCAGCTCTTGATGAAGAAATGCCAGCCACATTACTTGCAGACTCAGACAGCTTATTCATCACCTGCCAAGGGCTTTCTCTCCATTACAAGCTCAGTCTGCCTGGTTCACCTCCACATAACTTGTCCTCAACATCTTTCCTTGAATCTAGAGTATTTAGTTCTATAAGTTCTGTTGACAGCAGTACTTCATCAACGGCGGCGGGGTTGGCGAAATTTAATAGGCATTTGCTATGTATGTCTCCAAAAGTTCAGCGACAACTCTACAGGAGCTACAGCAATCAATTCCATACCTCATCTCTGTATGCTCCTCTTTTAGATGGTCCAGTAACTTCACCCCTTTCTGAAGATATTCCTGTTTTGCGTCTAGATGAAATTGGTGAAGATGAAACAATTAAATCGTGTTCTTTGTCTTTGGAGCAAAATTTAGAGGGTTTTGCTCAAGTAGGGATTGTTTTAATACACGGGTTTGGTGGAGGAGTCTTTTCTTGGCGTCATGTAATGGGATCTCTAGCTAGGCAGAGCAATTGCACTGTTGCTGCATTTGACAGGCCTGGTTGGGGATTAACTTCGAGGCTGCGTCGGGAGGATTGGGAGAAGAAAGACCTTCCTAATCCATATAAACTTGAAACTCAGGTTGACCTGCTGTTATCTTTCTGTTCTGAGATTGGATTTTCTTCAGTTGTCCTAATTGGTCATGATGATGGAGGGTTGCTTGCTTTGATGGCTGCGCAAAGAGTACAAACATCAATGAATTCTTTCAATGTTACTGTGAAAGGTGTTGTATTGCTAAACGTGAGCTTGTCAAGGGAAGTAGTTCCTTCCTTTGCCAGAATCCTTCTGCATACCTCACTTGGAAAGAAACATTTGGTTCGCCCTCTACTAAGAACAGAAATCACTCAAGTGGTTAATCGGCGTTCATGGTACGATTCTACCAAACTGACAACAGAAGTTGTGACTCTCTATAAGGCTCCACTATTTGTTGAAGGATGGGATGAAGCACTTCACGAGATTGGTAAATTGTCTTCTGAAACCATCCTTTCAGTTAAAAGTGCAGAATCGTTGCTGCAAGATGTAGAAGACATTCCAATGTTGGTCATAGCTGGTGCTGAAGATTCCCTCGTCTCTCTGAAATGCTGTCAAGCTATGGCCTCAAAATTTATAAATTCTTCTGTTTATCCATTTCATGGCACATGCAGAGACTGGTTGCAATATCTGGATGTGGTCATCTACCCCATGAAGAGTGTCCAAAGGCATTGCTTGCAGCTATATCACCCTTCATTACGAGACTCTTCCCTGTATATGACTCTCAAAGCCAATAAGATCTTATCTCTTTTCAATCTATTTATTGTAGGGCGCTTTATCCATTTTGTTTGTAAGTGA 2067 0.4354 MAKGGQCFEKVRRCIRTVFFVAALVASLLVTSLPVVVAVMDVLVPCILISSFTCVRCYSFKEHLLKYDFKSSLADIPMVSVIRSLIIICVYSICDGPALSHGPYLGTVTVSSLVSIVLLSVKACVFSVNSQIEAEASVSITRKKLHLKKSWGMPVLFLSSVVFALGHIVVAYRTSCRARRKLLFHRVDPEAVLSCKSVFSRYQKVPRSPVPSGGRTPKSDSEMRRRPFGAALDEEMPATLLADSDSLFITCQGLSLHYKLSLPGSPPHNLSSTSFLESRVFSSISSVDSSTSSTAAGLAKFNRHLLCMSPKVQRQLYRSYSNQFHTSSLYAPLLDGPVTSPLSEDIPVLRLDEIGEDETIKSCSLSLEQNLEGFAQVGIVLIHGFGGGVFSWRHVMGSLARQSNCTVAAFDRPGWGLTSRLRREDWEKKDLPNPYKLETQVDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQTSMNSFNVTVKGVVLLNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITQVVNRRSWYDSTKLTTEVVTLYKAPLFVEGWDEALHEIGKLSSETILSVKSAESLLQDVEDIPMLVIAGAEDSLVSLKCCQAMASKFINSSVYPFHGTCRDWLQYLDVVIYPMKSVQRHCLQLYHPSLRDSSLYMTLKANKILSLFNLFIVGRFIHFVCK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1159 688 Gene3D alpha/beta hydrolase 361 626 IPR029058 -
Lal10g1159 688 SUPERFAMILY alpha/beta-Hydrolases 379 625 IPR029058 -
Lal10g1159 688 Pfam Cholesterol-capturing domain 58 134 IPR019498 -
Lal10g1159 688 Pfam Alpha/beta hydrolase family 379 604 IPR000073 -
Lal10g1159 688 PANTHER ALPHA/BETA FOLD HYDROLASE 5 621 - -
Lal10g1159 688 MobiDBLite consensus disorder prediction 205 224 - -
Lal10g1159 688 PANTHER HYDROLASE 5 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1159 Lal-Chr10 18243339 18248556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1159 1 625 Miscellaneous Gene Families AT1G80280 61.331 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1159 - - lang:109358620 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1159 10 18243339 18248556 Lal10g1159 10 18243339 18248556 ECH
Lal10g1159 10 18243339 18248556 Lal8g0222 8 1482420 1487936 LSH
Lal10g1159 10 18243339 18248556 Lal18g0198 18 1645873 1652180 PCT
Lal18g0198 18 1645873 1652180 Lal10g1159 10 18243339 18248556 PCT