Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0988 ATGGCATCCCAGGTTCCCAAATTGGGTTCCTTTCGCCACAGTTTCAAAGAGAGGAAGGAAAGGTTGTTATCTATGAAGGGTGGTAGTTATTCACAGATAGGGATTGTTCTACCGGAATCCGATGACGAGACAGATGTTACGGTGGCGAGGAGGTGGTGGCGGCGGTGCTCCGATGGGGTAGTGATGGGGTGGAAAAAGGTGAAGCACGTGTCTGCTAGCGCGTGGGAAATGGGTCATTCTGATCCAAGGAAGGTTATATTTTCTGCAAAAGTGGGACTTGCTCTGATGCTTATTACCCTTTTGATATTCCTTAAAGAACCCTTCAAAGATCTTAGTAGATACTTTGTTTGGGCTGTTCTCACTGTTGTTGTCGTCTTTGAATTCAGCATAGGGGCAACTCTTAGCAAAGGGCTCAATAGAGCAGTGGGGACTTTGTCAGCTGGAGGAATTGCTTTGGGAATGGCAGAATTATCAAAGTTGGCTGGACAGTGGGAAGAAGTTGCTATTATTATTAGCATCTTCCTTGTAGGATTTTGTGCTACCTATGCAAAACTGTACCCGACTATGAAAGCTTACGAATATGGTATCCGTGTGTTCATGATCACATATTGCCTTGTTACTGTATCTGGGTATCGAACTGGGGATTTTATTGCCACAGCTACACATAGGTTTGTGCTCATCGCACTTGGCGCTGCTGTATCTTTGGGAGTAAATATATTTATATTCCCAATCTGGGCTGGTGAGGATCTACATGCTCTTGTGGCAAAAAATTTCACCGGTGTTGCATCATCATTGGAAGGCGTTGTCAATAGCTACCTCAATTGTATTGAATATGAGAGGGTGCCCTCAAAAATTCTTACATACCAAGCTTCCGATGATCCAGTTTATAGTGGTTACAGATCAGTTGTTGAATCCACAAGCAAAGAGGATGCACTGCTGGGTTTTGCTGTGTGGGAGCCTCCTCATGGCCATTACAAAATACTCAGATATCCATGGAAAAATTATGTGAAAGTAAGTGGGGCACTAAGACATTGTGCATTTTCGGTCATGGCTATGCATGGATGTATACTTTCAGAAATACAGGCTCCACCTGAGAAGAGACAAGTTTTCCGCAATGAGCTTAAGAAGGTATGTTCTGAAGGGGCGAAAGTGCTACGGGAAATCGGAAACAAGGTTAAAAAGATGGAGAAGTTGGATGATGGAGACATTCTATTTGACGTACATGAGGCGGCCGAAGAACTGCAACAAAAAATTGATAAAAAGTCCTTTCTTCTTGTAAATTCAGAGAGCTGGGAAATCAGAAACCGGCCGAGTCATGAGGTTGAACCCCAAGACCTCTTAAGCAATGACGAAGAAACACATTTCTTGGAGTACAAGTCTCGTAGTGAAGCCATGCTTGATCTCAGCGCAGTTAGAGTTCCAAAATTTTGGGGTGAAAATGGTGTTCCTGAAGTTAAACCTGCAGCTATTGTGGAAGAAAACATGTTCAAGAAACAGATATCTTGGCCAGCTCACAATTCCTTTCAAGCAGGTGCAACCTTAAAAATGGCAGAATCAAAAACCTATGAAAATGCTAGTTCACTATCTGTAGCAACTTTTACATCCCTTCTGATTGAATTTGTGGCAAGGCTACCGTACCTTGTGGATTCATTTGAAGAGCTAGCTGAGGTAGCAAAGTTTAAGGATCCTCTTAAGCAGCAATCACAGGAATTACCCAATGGGTTTTGA 1728 0.4306 MASQVPKLGSFRHSFKERKERLLSMKGGSYSQIGIVLPESDDETDVTVARRWWRRCSDGVVMGWKKVKHVSASAWEMGHSDPRKVIFSAKVGLALMLITLLIFLKEPFKDLSRYFVWAVLTVVVVFEFSIGATLSKGLNRAVGTLSAGGIALGMAELSKLAGQWEEVAIIISIFLVGFCATYAKLYPTMKAYEYGIRVFMITYCLVTVSGYRTGDFIATATHRFVLIALGAAVSLGVNIFIFPIWAGEDLHALVAKNFTGVASSLEGVVNSYLNCIEYERVPSKILTYQASDDPVYSGYRSVVESTSKEDALLGFAVWEPPHGHYKILRYPWKNYVKVSGALRHCAFSVMAMHGCILSEIQAPPEKRQVFRNELKKVCSEGAKVLREIGNKVKKMEKLDDGDILFDVHEAAEELQQKIDKKSFLLVNSESWEIRNRPSHEVEPQDLLSNDEETHFLEYKSRSEAMLDLSAVRVPKFWGENGVPEVKPAAIVEENMFKKQISWPAHNSFQAGATLKMAESKTYENASSLSVATFTSLLIEFVARLPYLVDSFEELAEVAKFKDPLKQQSQELPNGF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0988 575 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 569 - -
Lal10g0988 575 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 569 - -
Lal10g0988 575 Pfam Aluminium activated malate transporter 75 555 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0988 Lal-Chr10 17119170 17123370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0988 7 563 Miscellaneous Gene Families AT3G18440 60.727 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0988 - - lang:109343016 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0988 10 17119170 17123370 Lal10g0988 10 17119170 17123370 ECH
Lal8g0420 8 2825294 2829943 Lal10g0988 10 17119170 17123370 LSH