Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0843 ATGAAGCTACTATTTGCAACTGTGCTACTTCTGTTCCTTTTCCTCAGCTCCTCTATGTTTGAAATCTCAATAGCTGCTTCTGATTTGTGTGGCTCAAAGTGTTCAAGCAGGTGCTCTAAGGCTGGGAGACAAGATAGGTGTATGAGATTCTGTGTGATATGTTGCAGTAAGTGTCACTGTGTTCCATCTGGGACTTATGGGAACAAGCATGAGTGTCCTTGCTACAAGGACATGAAAAACTCTAAGGGCAAACCCAAATGCCCTTAA 267 0.4307 MKLLFATVLLLFLFLSSSMFEISIAASDLCGSKCSSRCSKAGRQDRCMRFCVICCSKCHCVPSGTYGNKHECPCYKDMKNSKGKPKCP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0843 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 88 - -
Lal10g0843 88 PANTHER GIBBERELLIN REGULATED PROTEIN 1 88 - -
Lal10g0843 88 Pfam Gibberellin regulated protein 30 88 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0843 Lal-Chr10 16008156 16009469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0843 - - gmx:100500113 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0843 10 16008156 16009469 Lal24g0304 24 2177292 2177885 ECH
Lal10g0843 10 16008156 16009469 Lal10g0843 10 16008156 16009469 ECH
Lal10g0843 10 16008156 16009469 Lal21g0227 21 1496269 1497118 PCT
Lal10g0843 10 16008156 16009469 Lal4g0139 4 871144 872026 PCT
Lal21g0227 21 1496269 1497118 Lal10g0843 10 16008156 16009469 PCT
Lal4g0139 4 871144 872026 Lal10g0843 10 16008156 16009469 PCT