Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal10g0647 | ATGGAAGACCAAGAACAACTCAAAAAGTCTAAGGTTGTCAAAATAGATTCAAAGGAATCATGGTTACATAACATCTCACTTGCTTCCAAACAAGGCTACCCTGTTGTAGTTCATTTCTCTGCTTTCTGGTGTGTACCTTCTATAGTTATGAATCCTTTCTTTGAAGAATTGGCTTCTACCTATCAAAATGTTAAGTTTCTGACATTGGATGTTGATGAGGTTAAGGAAATTGCATCCAGGTTGGAAATTAAAGCCATGCCTACATTTTTGTTGCTTAGTGAAGGAGATCAGGTAGATAAAATTGTGGGTGCAAATCCTAATGAGGTAAAGAAAAGGGTCCATCATTTTATTCACTCAACTAAATAA | 366 | 0.3579 | MEDQEQLKKSKVVKIDSKESWLHNISLASKQGYPVVVHFSAFWCVPSIVMNPFFEELASTYQNVKFLTLDVDEVKEIASRLEIKAMPTFLLLSEGDQVDKIVGANPNEVKKRVHHFIHSTK | 121 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal10g0647 | 121 | Pfam | Thioredoxin | 20 | 110 | IPR013766 | - | |
| Lal10g0647 | 121 | CDD | TRX_family | 34 | 113 | - | - | |
| Lal10g0647 | 121 | ProSiteProfiles | Thioredoxin domain profile. | 1 | 118 | IPR013766 | - | |
| Lal10g0647 | 121 | SUPERFAMILY | Thioredoxin-like | 7 | 115 | IPR036249 | - | |
| Lal10g0647 | 121 | PANTHER | THIOREDOXIN | 1 | 121 | - | - | |
| Lal10g0647 | 121 | Gene3D | Glutaredoxin | 1 | 121 | - | - | |
| Lal10g0647 | 121 | PANTHER | THIOREDOXIN | 1 | 121 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal10g0647 | Lal-Chr10 | 14300152 | 14308938 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal10g0647 | K03671 | - | gmx:100499858 | 197.593 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal10g0647 | 10 | 14300152 | 14308938 | Lal1g0538 | 1 | 3456607 | 3458006 | PCT | |
| Lal1g0538 | 1 | 3456607 | 3458006 | Lal10g0647 | 10 | 14300152 | 14308938 | PCT |