Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0623 ATGGCACTCTATTCCGTGTGTTCTGTTTCTCAGCTTCTTCGCGCCAACGCTCTCTCTCCGTCGCAACCGTTTCCGACGATTCTTAACGGTCACTTAATTGTTGACTTCGCTGGTCTCTCTTCCAAATCGAAACGACGCAACCGGAGACTATCGTCTTCGCCGTCGTTTCATTCTCCGAGATCGCGATTCCGTCGTTCATCGCTCAAAGCTGTTCTTGAACTTAACCGATGTAATAACAACAACAACGCTTCTGATGCTTCCTCCGATTTAAAGCCAAAGGTTGCAAACTTGGAGGACATACTATCAGAAAGAGGAGCCTGTGGTGTTGGATTCATTGCCAATTTGGAAAATAAAGCATTCCATGAGATTGTCAAGGATGCTCTACATGCTTTAGGCTGTATGGAACATCGTGGAGGCTGTGGAGCAGATAATGACTCTGGTGATGGTTCAGGGCTAATGACTGCAATTCCATGGGATCTATTTGACAATTGGGCCAGCAAGCAAGGGATTGCTTCCTTTGATAAGTTACACACTGGTGTTGGAATGGTTTTCCTACCCAAAGATGTTGAACTTCTGAATGAGGCTAAGAAAGTTGTTGTAAATATTTTTCGGCAAGAAGGTCTTGAGGTGCTTGGGTGGAGGCCTGTCCCTGTAAATGCTTCTGTAGTAGGTTATTATGCAAAGGAGACCATGCCCAACATACAGCAGGTATTTGTTAGGATCTTGAAAGAAGAAAATGTCGATGACATTGAAAGAGAATTGTACATCTGTCGGAAATTGATTGAAAAAGCAGTAAGCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCCAATCAAACCATAGTTTACAAGGGGATGCTTCGTTCAGAAGTTCTTGGGTTATTTTATTCTGACCTTCAAAATGATCTATATAAGTCCCCCTTTGCAATTTATCATCGAAGATATAGTACAAACACTAGTCCCAGGTGGCCTCTTGCCCAGCCAATGAGACTTCTTGGCCATAATGGAGAAATCAACACTATACAGGTTGAGGGGAACTTGAATTGGATGCAATCACGAGAAACGTCATTGAAGTCTCCTGTATGGCGGGATCGTGAAAATGAAATTCGTCCATATGGAAACCCAAAGGCATCAGACTCGGCAAATCTTGATAGTGCTGCAGAATTATTGATAAGAAGTGGTCGTAATCCTGAGGAAGCTATGATGATTCTTGTTCCAGAGGCTTACAAAAATCACCCAACTCTGACAATCAAATACCCTGAGGTGGTTGACTTCTATGATTACTACAAGGGTCAGATGGAGGCTTGGGATGGACCAGCATTGCTGTTATTCAGTGATGGAAAAACTGTCGGTGCATCTCTTGATCGAAATGGACTAAGACCTGCTAGGTACTGGCGAACATCAGACAATATGGTCTACGTTGCCTCTGAGGTTGGTGTTGTGCCAGTGGATGACTCAAAGGTTATCTCAAAAGGCCGATTAGGTCCAGGCATGATGATTACTGTTGATTTAGTTGGTGGTCAGGTGTATGAGAATACAGAGGTTAAAAAGCGAGTAGCATTATCAAATCCATATGGGAACTGGATCAAGGAAAATCTGCGGTCTTTGAAGCCTGTGAACTTTCTTTCAGCAGCTGTAATGGACAATGATGCAGTATTAAGAAACCAACAGGCATTTGGGTACTCTAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTGCTCAAGGAAAGGAGCCCACATTTTGCATGGGAGATGATATTCCACTGGCAGCGTTGTCTCAGAAGCCTCACATGCTTTTTGATTATTTTAAGCAACGCTTTGCACAGGTTACAAACCCTGCTATTGATCCTCTTCGAGAAGGATTGGTTATGTCTCTTGAAGTCAACATAGGGAAACGAGGGAATATACTGGAAGTTGGACCAGAGAATGCTTCACAGGTTATATTGTCTAGTCCGGTATTGAACGAAGGGGATCTTGAGTCATTACTAAAGGACACACACTTAAAACCACAAGTATTGCCCACATTTTTTGATATATCTAAGGGGATTGATGGTTCCTTGGAAAAAGCATTAAATAAGCTTTGTGAAGCTGCAGATGAAGCTGTTAGAAATGGTTCTCAGTTGCTTGTTCTTTCTGACCGTTCTGATGAACTGCAACCAACACACCCTGCAATTCCTATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATTGAGAATGGCCTGAGGACGTCAGCTTCAATTGTAGCTGATACTGCTCATTGCTTTAGCACTCATCAGTTTGCATGTTTAATAGGATATGGTGCAAGTGCTGTCTGTCCATACTTGGCATTGGAGACATGCCGACAGTGGCGTTTGAGTAACAAAACTGTAAATCTAATGAGGAATGGAAAGATGCCTACTGTATCAATTGAACAAGCACAGAAAAACTATTCCAAGGCTGTAAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATGGGCATCTCATTACTATCAAGTTACTGTGGTGCACAGATATTTGAAGTTTATGGGTTGGGGAAAGAAGTTGTCGATCTTGCATTCAGAGGAAGTGTGTCAAAAATTGGTGGATTAACTTTTGATGAGCTGGCAAGAGAGACTCTGTCTTTCTGGGTGAAGGCATTCAGTGAAGATACCGCTAAAAGATTGGAAAATTTTGGATTTATACAATTCAGACCTGGGGGGGAGTATCATGCAAATAATCCTGAGATGTCAAAGTTGCTCCACAAAGCTGTTCGTCAAAAAAGTCAAAGTGCCTTTTCAGTTTACCAGCAGCATTTGGCTAATCGACCTGTTAATGTTCTTCGTGATCTTGTTGAGTTTAAAAGTGATCGTTCTCCAATACCTGTGGGGAAGGTTGAACCTGCTTCTTCTATTGTTCAAAGGTTTTGCACTGGCGGGATGTCACTTGGAGCTATTTCAAGAGAAACTCATGAAGCAATTGCAATTGCAATGAACAGATTAGGCGGAAAGTCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTTCAGATGTTGTTGATGGTTACTCTCCAACTCTTCCTCATCTCAAAGGTCTTCAAAATGGGGATACTGCTACTAGTGCTATCAAGCAGGTTGCTTCAGGAAGGTTTGGTGTCACCCCAACATTCTTGGCAAATGCTGATCAAATAGAAATAAAAATTGCACAAGGTGCAAAGCCTGGTGAAGGTGGACAATTACCTGGGAAAAAAGTTAGCATGTATATAGCACGGTTGAGAAATTCTAAGCCAGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGATCTTGCTCAACTGATATTTGATCTTCATCAGGTGAACCCTAGGGCCAAGGTGTCAGTAAAATTGGTTGCTGAAGCTGGAATTGGCACTGTTGCATCTGGAGTTGCTAAGGGAAATGCTGACATTATACAGATTTCAGGGCATGATGGTGGAACGGGAGCAAGCCCGATAAGTTCCATCAAGCATGCAGGAGGTCCTTGGGAACTTGGACTCACAGAATCTCACCAGACACTAATTGAAAATGGACTTAGAGAAAGGGTCATTCTCAGAGTTGATGGTGGCTTTAGAAGTGGAGTTGATGTCATTATGGCAGCAATAATGGGTGCTGATGAATATGGGTTTGGGTCAGTGGCAATGATTGCTACTGGGTGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGCTGCGTGCACGCTTTCCTGGTGTTCCTGGAGATCTCGTCAACTTCTTTTTATATGTTGCTGAGGAGGTAAGAGGCATATTGGCACAACTGGGGTATGAGAAGTTGGATGATATAATTGGCCGGACAGGCTTGTTGCGACCAAGAGACATCTCTCTACTGAAAACTCAGCACCTAGATTTAAGTTATCTCCTCAATAATGTTGGATTGCCTAAATGGAGTAGTTCAGAAATCAGGAGTCAAGAGCCTCATACCAACGGTCCTGTTCTCGATGATGTTTTGCTAGCAGATCCAGAGATTGTAGATGCCATTGAAAATGAAAAAGTGGTTAGTAAGACTACAAAAATATACAACATCGATCGTGCTGTTTGTGGGCGTTTAGCTGGTGTCATTGCAAAGAAGTATGGTGACACTGGTTTTGCTGGACAGTTGAATCTAACATTTACAGGAAGTGCTGGGCAGTCATTTGCATGCTTTTTAACACCTGGAATGAACATACGACTTGTCGGAGAGGCTAATGATTATGTGGGGAAGGGCATTGCTGGAGGTGAGTTGGTTGTCACTCCAGTTGACAAGACGGGATTTCAACCCGAGGATGCGACTATTGTGGGGAACACTTGCTTGTATGGAGCAACGGGTGGACAGGTCTTTGTTAAAGGGAAAGCTGGGGAGAGATTTGCTGTGAGAAACTCACTTGCTGAAGCTGTGGTTGAAGGCACAGGAGATCATTGTTGCGAGTACATGACTGGTGGCTGTGTGGTTATCCTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACTGGAGGGTTGGCCTACATTCTTGACGAGGACAATACTCTTATACCCAAGGTAAACAGAGAAATTGTAAAAATCCAACGAGTGTCAGCACCTGTGGGGCAGACACAGCTGAAGAGCCTAATTGAAGCCCATGTTGAAAAAACGGGAAGTAACAAAGGTGCAGCTATTCTGAAGGACTGGGAAAAGTACTTACCACTATTTTGGCAGCTGGTTCCACCTAGTGAAGAAGACACTCCTGAAGCTAATCCCAAGTATGACACAACTACTGCAGATCAGGAATTGTCCTTTAATTTTAAGAGTAATAGTTTTGCTAAAATTAATCTATTTGTTTCTTTCTTTGGTAATAAATGGCCAACAAATGATAAAATAGAATTGAAATGA 4962 0.4283 MALYSVCSVSQLLRANALSPSQPFPTILNGHLIVDFAGLSSKSKRRNRRLSSSPSFHSPRSRFRRSSLKAVLELNRCNNNNNASDASSDLKPKVANLEDILSERGACGVGFIANLENKAFHEIVKDALHALGCMEHRGGCGADNDSGDGSGLMTAIPWDLFDNWASKQGIASFDKLHTGVGMVFLPKDVELLNEAKKVVVNIFRQEGLEVLGWRPVPVNASVVGYYAKETMPNIQQVFVRILKEENVDDIERELYICRKLIEKAVSSESWGNELYFCSLSNQTIVYKGMLRSEVLGLFYSDLQNDLYKSPFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQVEGNLNWMQSRETSLKSPVWRDRENEIRPYGNPKASDSANLDSAAELLIRSGRNPEEAMMILVPEAYKNHPTLTIKYPEVVDFYDYYKGQMEAWDGPALLLFSDGKTVGASLDRNGLRPARYWRTSDNMVYVASEVGVVPVDDSKVISKGRLGPGMMITVDLVGGQVYENTEVKKRVALSNPYGNWIKENLRSLKPVNFLSAAVMDNDAVLRNQQAFGYSSEDVQMVIESMAAQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENASQVILSSPVLNEGDLESLLKDTHLKPQVLPTFFDISKGIDGSLEKALNKLCEAADEAVRNGSQLLVLSDRSDELQPTHPAIPILLAVGTVHQHLIENGLRTSASIVADTAHCFSTHQFACLIGYGASAVCPYLALETCRQWRLSNKTVNLMRNGKMPTVSIEQAQKNYSKAVKAGLLKILSKMGISLLSSYCGAQIFEVYGLGKEVVDLAFRGSVSKIGGLTFDELARETLSFWVKAFSEDTAKRLENFGFIQFRPGGEYHANNPEMSKLLHKAVRQKSQSAFSVYQQHLANRPVNVLRDLVEFKSDRSPIPVGKVEPASSIVQRFCTGGMSLGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRWKPLSDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQIEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPRAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLIENGLRERVILRVDGGFRSGVDVIMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGILAQLGYEKLDDIIGRTGLLRPRDISLLKTQHLDLSYLLNNVGLPKWSSSEIRSQEPHTNGPVLDDVLLADPEIVDAIENEKVVSKTTKIYNIDRAVCGRLAGVIAKKYGDTGFAGQLNLTFTGSAGQSFACFLTPGMNIRLVGEANDYVGKGIAGGELVVTPVDKTGFQPEDATIVGNTCLYGATGGQVFVKGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDNTLIPKVNREIVKIQRVSAPVGQTQLKSLIEAHVEKTGSNKGAAILKDWEKYLPLFWQLVPPSEEDTPEANPKYDTTTADQELSFNFKSNSFAKINLFVSFFGNKWPTNDKIELK 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0623 1653 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 107 535 IPR029055 -
Lal10g0623 1653 CDD GltS 107 526 - -
Lal10g0623 1653 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1343 1606 IPR036485 GO:0016491
Lal10g0623 1653 SUPERFAMILY FMN-linked oxidoreductases 552 1331 - -
Lal10g0623 1653 Pfam GXGXG motif 1375 1557 IPR002489 GO:0016491
Lal10g0623 1653 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 107 508 IPR017932 -
Lal10g0623 1653 Pfam Conserved region in glutamate synthase 909 1293 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lal10g0623 1653 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 107 645 IPR029055 -
Lal10g0623 1653 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2, CHLOROPLASTIC 64 1620 - -
Lal10g0623 1653 Pfam Glutamate synthase central domain 558 850 IPR006982 GO:0006807|GO:0015930
Lal10g0623 1653 Gene3D - 1331 1606 IPR036485 GO:0016491
Lal10g0623 1653 Gene3D Aldolase class I 535 901 IPR013785 -
Lal10g0623 1653 Pfam Glutamine amidotransferases class-II 107 531 IPR017932 -
Lal10g0623 1653 CDD GltS_FMN 912 1307 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lal10g0623 1653 Gene3D Aldolase class I 583 1309 IPR013785 -
Lal10g0623 1653 CDD gltB_C 1350 1600 IPR002489 GO:0016491
Lal10g0623 1653 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 64 1620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0623 Lal-Chr10 14011224 14047890 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0623 K00284 - gmx:548016 2947.15