Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0622 ATGATTGGTAAAGATAGCAATGTTATGAAGGCATGGGAATTCACGGTAAGGAAGACACATGCAGCTGCAAAGAAACGTGCTAACAGCATATTCGGGACAATATCTTTAGCCAATGTAGAGGTAGAAGAAGATGAAAACAATCGCGATGACAATGATGACGACGATGACGATGAAAATGGAAGCAAGACATTTGAACTATACCAAGCAGATAAGGTTCTAGCCAATGGTGATTACTATACAGGAGAATGGGCAGATAATTTACCACATGGGATTGGAAAATATTTATGGACAGATGGGTGCATGTATGTTGGAGAATGGTATAAAGGAAAAACAAAGGGAAAGGGTAGGTTTAGTTGGCCTTCAGGGGCAACTTATGAAGGAGAATTCAAGAGTGGTTTCATGGATGGAAATGGAACATACACAGGGTGCAATGGGGATACTTATAAGGGACAATGGGTTATGAATTTGAAACATGGTCATGGTCTAAAGAGTTGTGTGAATGGTGATTGGTATGAAGGGGAATGGAGAAGGGATTTGCAAGAAGGGAATGGGAGATATGAGTGGAAAGATGAGAGTTATTATGTTGGGGAATGGAAGAATGGGAGTGTTTGGGGTAAAGGGTCATTTTTTTGGGCTAATGGGAATAGTTTTGAAGGGTATTGGGAAGAAGGTTTGCCTAAAGGGAATGGAACTTTTAAATGGCATGATGGGAGTTATTATGAGGGGAATTGGAATAAGGATGCAAAAGATTATAATGGAACATTTTATCCATCTGAGTCATCAGAGGAGGGTCATTTTGATTGGGATCCTCAAGAATTGTATGATGATTTGAGTGGATATGTGGTTTGTACTACGGAGAAGGTTTCGATTTTGTCGTCGCAGAAGAGGCTCGCAGTTTGGAGGTCTAAAAAGGGAGGGGATAGTGGTAAGAATGGAAGAACATCAGTGGATGGTAGGGTGAGTAGTGAAGGTGCTGAAAGGACACCTGATAGGACAAATTTATGTGATGGTGGTGGGGGTGAAGGTAATGTTAGTGCAGGTCCTAGAACTTCAACTGTGGGGTGTGAATTGGATGAAGAGTTAATGGCTTTGCAAGTAGATAATCTTGATGACATTGTAGCTCAACTCCAACCTCTAAAAGCACCTAAGAAATCAAAGAGGCAGGGAGAAACTATATGCAAAGGGCATAAAAATTATGAGCTCATGCTCAATTTGCAGCTTGGAATTAGGCATTCTGTTGGAAGACCTGCTCCTGCAGCATCACTTGATCTGAAGCCTTCAGCTTTTGATCCTAAGGAAAAAGTATGGACAAGATTTCCACCTGAAGGATCCAAGTACACTCCACCACATCCATCATGTGACTTTAGATGGAAGGACTATTGCCCTGTAGTTTTTAGGACTCTTCGGAAGCTATTCAACGTGGATTCGGCGGATTACATGTTATCTATATGTGGAAATGATGCACTTCGCGAACTTTCCTCGCCTGGAAAAAGTGGTAGCTTCTTTTACTTGACCGATGATGATCGTTACATGATTAAGACAATGAAGAAAGCCGAAGTGAAAGTTCTAATAAAAATGCTTCCAGCCTATTATAATCATTTTCGAGCCCACGAAAATACTCTGTTGACAAAGTATTATGGCCTGCATTGTGTAAAGTTAACTGGAACTGCCCAAAAGAAGGTTCGGTTTATCATAATGGGCAACCTCTTCCGTTCTGAGTATACTATCCATAGACGATTTGATTTGAAAGGTTCTTCATTAGGCCGCACGACAGATAAACCTGAGGCAGAGATTAGTGAAACCACTATCCTTAAAGATCTTGATCTTAATTTTATATTCCGGCTACAAAAATCTAGGTTTCAAGAATTTTGCAGACAAGTTGATAGGGATTGCGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTTTATTAGTGGGCATTCATTTCAAAGATATATCACATGATGGGGACATTATTCCTTCTGGTGGATCTCAGACTCCTTGTGGTGATTCAGAGAATGAAGGAACTCCCCACCTTACAAGAAAAGATACTGATCAACTTCTTTTAGATCCTGCCAGATGGGCTAGTATAGTATTGGGTGTGAATATGCCAGCAAGAGTTGAAAGGACAGTGAGAAGAAATGATATTGAATTACAACTTATAGGAGAACCAATTGGAGAATTTTATGAAGTTGTATTATTTTTTGGTATCATAGACATACTTCAAGACTATGATATTAGCAAGAAGCTTGAACATGCATATAAGTCCATTCAATATGACCCGACTTCAATATCCGCTGTTGATCCTAGACAATATTCGAGGCGATTTCGTGACTTTATATTTAGAATATTTACCGAAGATTCTTAA 2370 0.3983 MIGKDSNVMKAWEFTVRKTHAAAKKRANSIFGTISLANVEVEEDENNRDDNDDDDDDENGSKTFELYQADKVLANGDYYTGEWADNLPHGIGKYLWTDGCMYVGEWYKGKTKGKGRFSWPSGATYEGEFKSGFMDGNGTYTGCNGDTYKGQWVMNLKHGHGLKSCVNGDWYEGEWRRDLQEGNGRYEWKDESYYVGEWKNGSVWGKGSFFWANGNSFEGYWEEGLPKGNGTFKWHDGSYYEGNWNKDAKDYNGTFYPSESSEEGHFDWDPQELYDDLSGYVVCTTEKVSILSSQKRLAVWRSKKGGDSGKNGRTSVDGRVSSEGAERTPDRTNLCDGGGGEGNVSAGPRTSTVGCELDEELMALQVDNLDDIVAQLQPLKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVGRPAPAASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFRWKDYCPVVFRTLRKLFNVDSADYMLSICGNDALRELSSPGKSGSFFYLTDDDRYMIKTMKKAEVKVLIKMLPAYYNHFRAHENTLLTKYYGLHCVKLTGTAQKKVRFIIMGNLFRSEYTIHRRFDLKGSSLGRTTDKPEAEISETTILKDLDLNFIFRLQKSRFQEFCRQVDRDCELLEQEGIMDYSLLVGIHFKDISHDGDIIPSGGSQTPCGDSENEGTPHLTRKDTDQLLLDPARWASIVLGVNMPARVERTVRRNDIELQLIGEPIGEFYEVVLFFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFRIFTEDS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0622 789 Gene3D - 696 785 - -
Lal10g0622 789 Gene3D - 569 688 - -
Lal10g0622 789 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 167 269 - -
Lal10g0622 789 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 74 178 - -
Lal10g0622 789 SMART PIPK_2 425 786 IPR002498 GO:0016307|GO:0046488
Lal10g0622 789 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 16 788 - -
Lal10g0622 789 PIRSF PIP5K_plant 15 789 IPR017163 GO:0005524|GO:0016308
Lal10g0622 789 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 384 568 IPR027484 -
Lal10g0622 789 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 395 785 IPR002498 GO:0016307|GO:0046488
Lal10g0622 789 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 16 788 IPR023610 -
Lal10g0622 789 CDD PIPKc_AtPIP5K_like 398 784 - -
Lal10g0622 789 SUPERFAMILY SAICAR synthase-like 394 785 - -
Lal10g0622 789 MobiDBLite consensus disorder prediction 41 61 - -
Lal10g0622 789 SMART morn 146 167 IPR003409 -
Lal10g0622 789 SMART morn 77 98 IPR003409 -
Lal10g0622 789 SMART morn 169 190 IPR003409 -
Lal10g0622 789 SMART morn 123 144 IPR003409 -
Lal10g0622 789 SMART morn 100 121 IPR003409 -
Lal10g0622 789 SMART morn 215 236 IPR003409 -
Lal10g0622 789 SMART morn 238 259 IPR003409 -
Lal10g0622 789 SMART morn 192 213 IPR003409 -
Lal10g0622 789 MobiDBLite consensus disorder prediction 43 60 - -
Lal10g0622 789 MobiDBLite consensus disorder prediction 302 349 - -
Lal10g0622 789 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 484 783 IPR002498 GO:0016307|GO:0046488
Lal10g0622 789 Gene3D - 177 227 - -
Lal10g0622 789 Gene3D - 81 131 - -
Lal10g0622 789 Gene3D - 132 176 - -
Lal10g0622 789 Pfam MORN repeat 217 238 IPR003409 -
Lal10g0622 789 Pfam MORN repeat 194 215 IPR003409 -
Lal10g0622 789 Pfam MORN repeat 102 123 IPR003409 -
Lal10g0622 789 Pfam MORN repeat 148 169 IPR003409 -
Lal10g0622 789 Pfam MORN repeat 171 190 IPR003409 -
Lal10g0622 789 Pfam MORN repeat 125 147 IPR003409 -
Lal10g0622 789 Pfam MORN repeat 79 101 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0622 Lal-Chr10 13995934 14001121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0622 1 789 Acyl Lipid Metabolism Gene Families AT3G56960 66.329 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0622 K00889 - gmx:100808754 1278.08