Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0607 ATGATAACTCTTTTAGACTTGTACCATGTTCTCACTGCTGTTGTGCCACTCTATGTGGCCATGATCCTAGCATATGGTTCAGTTAAATGGTGGAAAATCTTCAACCCTGACCAGTGCTCAGGCATAAACCGTTTTGTTGCACTTTTTGCAGTTCCACTCCTCTCATTCCACTTTATCTCTACAAATAATCCTTACAAGATGAACTACAAGTTCATAGCTGCAGATTCATTGCAAAAAACCATAGTCTTAACAGTTCTTGCAACATGGTCAAGGTTCAGCTCAAGGGGTTCATTAGAATGGTCCATAACCCTGTTCTCCCTTTCTACACTACCCAACACACTTGTCATGGGGATACCCTTACTTAAGGGCATGTATGGTGACTCATCAGGTACCCTTATGGTTCAGATTGTTGTTCTTCAGTGTATCATATGGTACACTTTGATGCTGTTCCTTTTTGAGTATAGAAGTGCAAGACTTTTGATAGTGGAGCAGTTTCCAGACACTGCAGGATCCATTATATCATTCAAAGTTGATTCTGATATTCTATCATTGGATGGGAAAGAACCTCTTCAGACTGAAGCTGAAGTTGGTGAAGATGGGAAGCTTCATGTTACTGTGAGAAAGTCAACAAGTTCAAGGTCTGAGATTTTCTCTAGAAAGTCTCATGGTCCTAACTCTGGTGTTTCACTCACACCAAGGGCTTCTAACTTGACCAATGCTGAGATTTACTCTCTTCAATCTTCTAGGAACCCTACTCCTAGAGGATCAAGTTTTAACCACACTGATTTTTATTCCATGGTGAATGGAAGGAACATGAGTGGTGTGAGTCCAAGGCAATCAAATTTTGGTAACTTGGGTTATGATGAAGAGAGTGGTGCTACTGTTTCTAGAACAAATAATGGTTATCCTGTTCCTCCAAATAATGGGATCTTTTCTCCAGTTACTGGTTCCAAGAAGAAGGATAATGGTGGTGGTGATGGTGGAAAAGATCTACACATGTTTGTTTGGAGTTCAAGTGCTTCTCCTGTTTCAGAAGGTGGAATCCATGTCTTCAGAGGTGGTGATTATGGAAATGAGCTTGCTGGGGTAGCTTCTCACCACAAAGATTATGATGATTTTGGCCACAATGAATTTAGCTTTGGAAACAGAACCGTGACAAATGGGGTAGACAAAGAGGGACCAGTACTTTCTAAACTTGGTTCAAGCTCCACTACTGAACTTCACCCCAAAAATTCTCAAAGTGAATCTAAACCCACTTCCATGCCACCTACTAGTGTTATGACCAGACTCATCTTGATAATGGTGTGGAGAAAGCTGATTAGGAATCCCAACACTTACTCTAGCCTCATTGGTCTTACTTGGTCCTTGATCTCATTCAAGTGGAATGTTGTGATGCCTGCAATTGTTGCTGGCTCAATATCAATCTTATCTAATGCAGGCCTTGGCATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAGCCAAGGATTATTGCTTGTGGAAACTCTGTTGCTTCTTTTGCTATGGCGATTCGTTTCCTTACTGGCCCTGCAGTCATGGCTGTTGCATCAATTGTTGTTGGACTAAGGGGAGTTTTGTTGCACATTGCTATTGTTCAGGCTGCTCTGCCACAAGGGATTGTACCCTTTGTATTTGCTAAGGAATACAATGTTCATCCAGACATACTAAGCACTGGGGTTATATTTGGGATGCTAATTGCTCTACCAATAACGCTGGTATACTACATTTTACTGGGGCTTTAA 1767 0.4148 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFNPDQCSGINRFVALFAVPLLSFHFISTNNPYKMNYKFIAADSLQKTIVLTVLATWSRFSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDSSGTLMVQIVVLQCIIWYTLMLFLFEYRSARLLIVEQFPDTAGSIISFKVDSDILSLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRKSHGPNSGVSLTPRASNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGRNMSGVSPRQSNFGNLGYDEESGATVSRTNNGYPVPPNNGIFSPVTGSKKKDNGGGDGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNELAGVASHHKDYDDFGHNEFSFGNRTVTNGVDKEGPVLSKLGSSSTTELHPKNSQSESKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLISFKWNVVMPAIVAGSISILSNAGLGMAMFSLGLFMALQPRIIACGNSVASFAMAIRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0607 588 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 588 - -
Lal10g0607 588 Pfam Membrane transport protein 9 583 IPR004776 GO:0016021|GO:0055085
Lal10g0607 588 MobiDBLite consensus disorder prediction 299 315 - -
Lal10g0607 588 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 588 - -
Lal10g0607 588 MobiDBLite consensus disorder prediction 299 329 - -
Lal10g0607 588 MobiDBLite consensus disorder prediction 397 423 - -
Lal10g0607 588 MobiDBLite consensus disorder prediction 391 423 - -
Lal10g0607 588 TIGRFAM 2a69: auxin efflux carrier 1 588 IPR014024 -
Lal10g0607 588 MobiDBLite consensus disorder prediction 213 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0607 Lal-Chr10 13818644 13822437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0607 1 579 Organic Solute Cotransporters AT1G73590 64.119 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0607 K13947 - qsu:111998072 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0898 8 6600068 6603323 Lal10g0607 10 13818644 13822437 LSH