Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0581 ATGGCAGAGACATTGATATGTAGAAGCAGAAATTCAGAGCTTAGTCCAGATGAAGAAAGGATAATAATCAGAGACATTGCTCTTTCTGCTCAAGCTAATAGCAAAGAAGGCGACACCTTTTTCTTAATTACACAGAGCGGTAGAGTCTCACCGCGTTGGCTTAACCCTCTACTGTTGACAAGTACTTTGTTTGGAGGAGGGTTATTGAGCTTGAGCATTATGCCTTTTGAAATTAGAAGATACATGGTTAAGAATAAGCTCATTGCTTTTCATTATGCAGCAGACTTCTCTGATATCCTCAGTGTCAGATGGTGGCAATATTGGATTGAATATGTGAACCAAGACCAGACGAACAATTCATATGATGGGTCTTCTTTGGCTGAACATTGTGATTTGGCCAATTCAAGTGCTTTAAAGAAACCACCTGGTATTGATAATTCTGATTTGATAGATGATGCTGTGTCAGAGGAATCCAATTCTGGTATTGAGATTCATGATACTCTCTTAGAAGGTCGTGACTATGTATTACTACCCCAAGAAGTTTGGAATCAATTGTATACATGGTATGGTGGTGGACCTACACTGCCAAGGAAAGTTATTAGTTCTGGTCTTTCCCAGACAGAGTTGACAGTAGAGGTGTATCCTTTACGGCTTCAGTTACTTGTGTTGCCAAAAAATGATCGTTCCATTATAAGAATAAGCAAGAAGGTTTCTATTTGGGATTACTATGGCCGTCGGAAGCATGCCTTGATGAATGACATGGACAAAACCCTTGATGATGCCAATTTACAAATGGACCAGGATATTCTTATTGAGGTCAACAATACGAATAACACAACATCTTCTCAAGAAAATGGATTTGCACAGAGGGAAGCGAGTTCTGTTCTAGTGGAGCCTCCAAAATCAAGCTTATCAATTGCTGGAGGTTTGTCTGCTAGCAAGGGTGCATCTAGAAGCTATAATGTGGAGCTTTCTTCGTCTCAGAACGTAAATTCTGCAGTCAGAGATGTGGAACACCCTTTTGGAACTAGTGGTGTCACAACAAGGGGTTCATTTGGTGGTCTCACTGGGTTGCTGAACCTTGGAAATACCTGTTTCATGAATAGTGCTATACAGTGCCTTGTTCATACGCCAGAATTTGCTAGGTACTTTAGGGAGGACTATCATCAAGAGATAAATTGGCAAAATCCACTGGGCATGGTTGGAGAGCTAGCCCTAGCATTTGGTGAATTGCTCCGAAAACTATGGGCACCTGGACGAACACCAATTGCTCCTCGTCCTTTTAAAGCAAAGCTTGCTCGCTTTGCACCCCAGTTCAGTGGGAATAATCAGCATGATTCTCAGGAGCTTTTAGCATTTCTGCTTGATGGTCTCCATGAAGATTTGAATCGTGTAAAGCACAAACCATATATAAAGTCTCGAGATGCTGATGGCCGACCTGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCACATTGCTCGTAATGATTCCATAATTGTTGATGTGTGCCAGGGGCAATACAAGTCAACTTTGGTCTGTCCAGTTTGCAATAAAGTCTCGGTAACATTTGATCCTTTCATGTACCTTTCCTTGCCACTCCAGTCGACCATTAATAGGACAATGACGGTGACAGTTTTTGCTTGTGATGGAACTACCCTGCCATCTCCTTCTACTGTAACTGTGCCTAAGCAAGGACGTTGCAGAGATCTGATCCAGGCACTTAGCAATGCTTGCTCATTGAAGCATAATGAGAGGATATTGCTTGCGGAGGTACGAAACCATTTGATTCATAGATTTCTTGAAGATCCTCTTATATCATTGTCCACGATCAAAGATGATGATCATCTTGCTGCTTACAAGATTCCGAAGATAGATAAAAACACAAAGTATCTCCAGTTGATACACCGCCGCAGAGAGCAGAGTAGTGACTCACAGATCGTATCAGGATGGAAACCTTATGGAACACCTATTGTTTCATTGATCTCATGCGATAATGCAGTCACAAGAGGTGATATACAAGTATTAGTTAACCGTATGCTTTCTCCTCTGCGGAAGAAAGGTGGAACTTTAGATCAGGCCACTGCTTCTGAAACCAGCACCCCAAAAGCCACACCTGACAAATGCAGTTCCACTGATTCTGGTGACACATGTGCTACCAACGTGGTATCAAATTCAGTAAATAAGGATGGTACTGGTTCAGGTTCCCCGCCAATACCAACATTACCTCTTCTGTTGGTAGATGAAAATAATGCTTGCATTGATCTTTCAATGGGAGAGGACAAAGTAGTTAAACTGTCACCTTCATCAACAATTCTAGTGTATATAGATTGGTCGCAGAAGCTTCTGGAAAAGTATGATACTCATTCACTAGAGACCTTGCCAGAAGTTTTAAAATATGGGCCTGTGACCAAGAAAGCTCGTACTGAACCTCTCTCGTTGTACACCTGCTTGGAAGCTTTTCTGCGTGAAGAACCTCTAGTCCCGGAAGATATGTGGTACTGTCCTCAATGCAAAGAAAGACGACAAGCAAGTAAAAAGCTCGATTTGTGGAGGCTTCCAGAAGTTTTGGTCATTCATTTAAAGAGGTTCTCATACAGCAGGTCAATGAAGCACAAATTAGAGACTTTTGTTAACTTTCCCATCCATGATTTTGAGTTAACAAATTACATAGCCAACAAAAGCAGCTCTCGGCGCCAGTTATATGAACTGTATGCCCTCACAAACCATTATGGTAGTATGGGTAGTGGGCATTACACTGCACATATAAAGCTTTTAGATGAAAACAAGTGGTACAATTTTGATGACAGTCACATATCATCCATAAGTGAAGACGAGGTTAACACAGCCGCGGCCTATGTTCTATTTTACCGGAGGGTGAAGACCGATGACGCCACTGTTAGCAATGGGGATTAG 2916 0.4184 MAETLICRSRNSELSPDEERIIIRDIALSAQANSKEGDTFFLITQSGRVSPRWLNPLLLTSTLFGGGLLSLSIMPFEIRRYMVKNKLIAFHYAADFSDILSVRWWQYWIEYVNQDQTNNSYDGSSLAEHCDLANSSALKKPPGIDNSDLIDDAVSEESNSGIEIHDTLLEGRDYVLLPQEVWNQLYTWYGGGPTLPRKVISSGLSQTELTVEVYPLRLQLLVLPKNDRSIIRISKKVSIWDYYGRRKHALMNDMDKTLDDANLQMDQDILIEVNNTNNTTSSQENGFAQREASSVLVEPPKSSLSIAGGLSASKGASRSYNVELSSSQNVNSAVRDVEHPFGTSGVTTRGSFGGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGNNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTINRTMTVTVFACDGTTLPSPSTVTVPKQGRCRDLIQALSNACSLKHNERILLAEVRNHLIHRFLEDPLISLSTIKDDDHLAAYKIPKIDKNTKYLQLIHRRREQSSDSQIVSGWKPYGTPIVSLISCDNAVTRGDIQVLVNRMLSPLRKKGGTLDQATASETSTPKATPDKCSSTDSGDTCATNVVSNSVNKDGTGSGSPPIPTLPLLLVDENNACIDLSMGEDKVVKLSPSSTILVYIDWSQKLLEKYDTHSLETLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFELTNYIANKSSSRRQLYELYALTNHYGSMGSGHYTAHIKLLDENKWYNFDDSHISSISEDEVNTAAAYVLFYRRVKTDDATVSNGD 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0581 971 Gene3D - 223 289 - -
Lal10g0581 971 MobiDBLite consensus disorder prediction 692 716 - -
Lal10g0581 971 ProSiteProfiles DUSP domain profile. 74 200 IPR006615 GO:0004843
Lal10g0581 971 SUPERFAMILY Cysteine proteinases 354 960 IPR038765 -
Lal10g0581 971 MobiDBLite consensus disorder prediction 688 716 - -
Lal10g0581 971 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 902 919 IPR018200 GO:0004843|GO:0006511
Lal10g0581 971 Gene3D Cysteine proteinases 346 585 - -
Lal10g0581 971 Pfam Ubiquitin carboxyl-terminal hydrolase 356 957 IPR001394 GO:0004843|GO:0016579
Lal10g0581 971 Pfam DUSP domain 99 200 IPR006615 GO:0004843
Lal10g0581 971 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 12 970 - -
Lal10g0581 971 Gene3D Cysteine proteinases 769 968 - -
Lal10g0581 971 SUPERFAMILY DUSP-like 80 200 IPR035927 -
Lal10g0581 971 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 356 960 IPR028889 -
Lal10g0581 971 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 357 372 IPR018200 GO:0004843|GO:0006511
Lal10g0581 971 SMART dusp 93 203 IPR006615 GO:0004843
Lal10g0581 971 CDD Peptidase_C19R 805 958 - -
Lal10g0581 971 Gene3D - 90 214 IPR035927 -
Lal10g0581 971 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0581 Lal-Chr10 13459583 13469647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0581 813 962 Miscellaneous Gene Families AT4G31670 33.987 9.58e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0581 - - gmx:100794067 1522.29