Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0558 ATGGACCGTAACCTTGTCTCTCCTTCTTCTTCTGTGGTCGTTTCTATGGAATCTTCCGGTCAAAGAACAAGAAGGCTCTACCAAGTTTGGAAGGGAAACAATAAATTTCTACTCGGTGGAAGATTAGTCTTTGGTCAGGATGCATCTTCTCTATTTTTAACGACGCTCCTAATTGGAGGTCCTGCAATAACATTCTGCATAAGAATGCTATTAAAAATTGAAGAGCATGATCCTCTCTTTAACCATTGTGTATTGATTGGAGGAGCAATTCTCACATCTTTGAGTTTTATTTTTCTCTTCATGACATCTGGTAGAGATCCCGGAATTGTCCCAAGGAATTCACAACCTCCTGAATCAGAAGAAGCACTCAATGTCAATACACCATCTATGGAGTGGGTAAACAATAAGACCCCTAACATGAAATTGCCTAGAGTGAAGGATGTGATGGTAAATGGCCATACAGTGAAGGTGAAGTTCTGTGATACATGCTTGCTCTATCGTCCGCCGCGTGCTTCCCATTGCTCTATCTGCAATAACTGTGTGCAGAAGTTTGATCATCATTGCCCTTGGGTTGGTCAATGTATTGGAGCACGTAACTATCCATTCTTCATATTGTTCATATCATCATCAACCTTGTTGTGTATATATGTGTTTGCATTTTCTTGGGTTAACCTTCTTCGCGAAAAGGGTAGATTGGGGTCCATCATGTCACACGATATCGTATCTGTTGCTCTCATTGTATATTGCTTCATTGCAATTTGGTTTGTGGGTGGCCTAACAGTTTTCCATCTTTATTTGATTTCCACCAATCAGACAACTTATGAGAATTTCCGATACCGCTATGATAAGAAGGAAAATCCATATACAAAGGGAATAATGGTCAACTTTAAAGAACTTTCATGTTCCAAGATCCCAAGTCCATTGATAAATTTCAGATCATTGGTTACAGAGGAGGAGGATGTTCAAGATGGATCCTTTACTTCAGATATTGAAAACGGTTTTATAAACCCGAAACATAAATTTGACATGGACATGGGAACAATGTATGGCAAGGATGGTAAGCGAGTTCCGAGTATTTTAGACGATTTGGATTATAATGGCATTGATGATCATCTGAAAAAGAAGGCAGGATCAAGAGAAGCCGGATATGAAATTTTCGCTAATGCTGATCAAGATCATAAGCTAACCCAATGGAAATCCAAAACTGGAGTCAATAGTCCTCTAGATGAGAGGAAGCAATAG 1242 0.3937 MDRNLVSPSSSVVVSMESSGQRTRRLYQVWKGNNKFLLGGRLVFGQDASSLFLTTLLIGGPAITFCIRMLLKIEEHDPLFNHCVLIGGAILTSLSFIFLFMTSGRDPGIVPRNSQPPESEEALNVNTPSMEWVNNKTPNMKLPRVKDVMVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIGARNYPFFILFISSSTLLCIYVFAFSWVNLLREKGRLGSIMSHDIVSVALIVYCFIAIWFVGGLTVFHLYLISTNQTTYENFRYRYDKKENPYTKGIMVNFKELSCSKIPSPLINFRSLVTEEEDVQDGSFTSDIENGFINPKHKFDMDMGTMYGKDGKRVPSILDDLDYNGIDDHLKKKAGSREAGYEIFANADQDHKLTQWKSKTGVNSPLDERKQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0558 413 PANTHER PROTEIN S-ACYLTRANSFERASE 3-RELATED 25 331 - -
Lal10g0558 413 ProSiteProfiles DHHC domain profile. 158 208 - -
Lal10g0558 413 Pfam DHHC palmitoyltransferase 157 278 IPR001594 GO:0016409
Lal10g0558 413 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 25 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0558 Lal-Chr10 13178212 13186485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0558 157 299 Lipid Metabolism Gene Families AT4G22750 31.818 6.78e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0558 - - gmx:100805939 648.277