Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0545 ATGATTAATATTTTGGAAGCCAAATCATCATACTATAATGCTAGCCTACAAATAACAACAAAAACTAAAGGGGTTTATTGGTTAGATCAAGTATCAGCTATTCCTGTGGACACACATAAGGGTAATGGCTTCCGAAATGACCTTTTCCAAATGTTGGCAAAATTAAAACCAAAATTTCTTAGATTTCCAGGTGGTTCCTCCGTTGAAGGAGTTAATCTAAGCAACACATATAAGTGGAAAGATACTGTTGGACCATGGGAAGAAAGACCTGGTCACTTTAATGATGCCTGGAACTATTGGACTGATGATGGCTTTGGTTTTTTTGAGGGTTTGCAACTAGCTGAGGACCTTAATGCATTGCCAGTATGGGTGTTCAACGCTGGTTTCAGCAATAAGGAACAAGTTAATTCATCAGATCTTTCATCTTACGTGCAAGATGCCTTAGATGGCATTGAGTTTGCAAGAGGTTATCCCTCATCAAAATGGGGTTCTATTAGAGCAGCTATGGGACATCCTAAACCATTTGACTTGAGATATGTAGCAATAGGAAATGAAGATTGTTGGAAGAGAAATTATCTTACAATTCATGATAAGATAAAACGTAGCTACCCAGATATTAAAATCATCTCAAATTGTGACGGCTCTATTACACCGTTAAATCAATCAGCTGATTTGTTCGACATTCATATTTATACAAATTCTACAGATATGTTTGCCAGGTCTAGTGAGTTCGATAAAACATCACGATCTGGCCCAAAGGCTTTTGTTAGTGAATATTCTGTGTGGAAAAAAGATGCTGCAATGGGAAGCCTTGTGGCTGCATTAGCCGAAGCAGCATTTCTAATTGGACTAGAAAAGAATAGTGATATTATGGAGATGGTTAGCTATGCACCATTATTCCTGAATATAAATGACAAGAAGTGGATTCCTAATGCAATTGTTTTTGACTCTTATCAACATTATGGAACTCCAAGCTATTGGGTGCAGAAATTTTTTACAGAATCAAGTGGAGCAATATTTCTCCCAACAACACTGAAGACTAATTCAACAAACTCAGTTATTGCATCTGCAATTAATTTGAAAGGGTCTAAGGATAATGAAAATTACATAAGAATAAAGGTAGTGAACTTTGGAATTACCCCTCAGAACCTTCAAATTTCTATAGATGGATTGAACTCAACTATTAAACAACTTGGTTCAACAAAGACAGTGTTGACATCATCAAACTTAATGGATGAAAATTCCTTCTTAGAGCCAAATAAGGCCGTGCCCATTCAAAGTTCAATTGAAAATGCAGCTGGGGAAATGAATGTTATACTCCCTCCATATTCAGTGACATCAGTTGATTTGTTAATATAA 1359 0.3628 MINILEAKSSYYNASLQITTKTKGVYWLDQVSAIPVDTHKGNGFRNDLFQMLAKLKPKFLRFPGGSSVEGVNLSNTYKWKDTVGPWEERPGHFNDAWNYWTDDGFGFFEGLQLAEDLNALPVWVFNAGFSNKEQVNSSDLSSYVQDALDGIEFARGYPSSKWGSIRAAMGHPKPFDLRYVAIGNEDCWKRNYLTIHDKIKRSYPDIKIISNCDGSITPLNQSADLFDIHIYTNSTDMFARSSEFDKTSRSGPKAFVSEYSVWKKDAAMGSLVAALAEAAFLIGLEKNSDIMEMVSYAPLFLNINDKKWIPNAIVFDSYQHYGTPSYWVQKFFTESSGAIFLPTTLKTNSTNSVIASAINLKGSKDNENYIRIKVVNFGITPQNLQISIDGLNSTIKQLGSTKTVLTSSNLMDENSFLEPNKAVPIQSSIENAAGEMNVILPPYSVTSVDLLI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0545 452 Gene3D - 334 450 IPR013780 -
Lal10g0545 452 Pfam Alpha-L-arabinofuranosidase C-terminal domain 258 444 IPR010720 GO:0046373|GO:0046556
Lal10g0545 452 Gene3D Glycosidases 24 333 - -
Lal10g0545 452 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 2 452 - -
Lal10g0545 452 SUPERFAMILY (Trans)glycosidases 16 348 IPR017853 -
Lal10g0545 452 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 2 452 - -
Lal10g0545 452 SUPERFAMILY Glycosyl hydrolase domain 323 448 - -
Lal10g0545 452 SMART alpha_l_af_c 257 444 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0545 Lal-Chr10 12993128 12996515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0545 4 451 Glycoside Hydrolase AT3G10740 60.927 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0545 K01209 - gmx:100802745 635.18