Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0533 ATGGAAGTGGATCCAAGGGAGAAGCTTTTAAGCACTAAGGAAACATCAAAAGAAGAAGAAGAAGAAGAAGAATTGTCATTGGTGAAAAGGGTATTGGAAGAGAGTAAGTTGATGTGGATAGTAGCAGCTCCAGCCATATTTACAAGATCTTCAACTTTTGGAATCAATGTTATCACACAAGCATTTGTTGGCCATATTGGCTCAAGGGAACTTGCTGCTTTTGCTCTTGTTTTCACTGTTCTTATAAGATTTGTCAATGGTGTTCTTTACGGAATGGCGAGCGCATTGTCAACACTTTGTGGACAAGCATATGGTGCAAAAGAATATGGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTATTATCCTTAACTGCAATCATTCTTCTTCCTTTCTTCATATTCACAACCCAAATTTTGATTTTATTAGGCCAAGATGAAAGCATAGCAGAAGTTGCAGGAACCATTTCACTTTGGTCAATTCCTATCATATTTGCTTATATAGTCTCATTCACTTGCCAAACATTCCTACAATCTCAAAGCAAGAATGTCATTATTGCATTTCTTGCAGCATTTTCAATCATCTTTCATGTGTGTCTGTCATGGCTTTTGGTTATAAAATTAAACCTAGGCCTTCCTTCTGCATTGATTGCTACAAGTTTGGCTTATTGGATTCCCAACATTGGACAACTTATATTTGTAACATGTGGTTGGTGTGATCAAACATGGAAAGGTTTTTCATTTTTAGCATTCAAAGAACTCTGGGCAGTTGTCAAGCTTTCAATTTCAGCTGGTGCCATGTTATGTCTTGAACTTTGGTACAACACAATATTGGTTCTTTTAACAGGCAACATGAAAAATGCAGAGGTTGAAATTGATGCTCTGTCTATATGTTTGAATATCAATGGATGGGAAATGATGATATCTCTTGGTTTCATGGCTGCAGCAAGTGTTCGGGTAGCTAATGAACTTGGGAAAGGAAGTGCCAAAGCTGCAAAGTTCTCTATAATTGTGACAGTTCTTACATCATTGACCATTGGGTTCATTCTGTTTTTGTTTTTCTTATTCTTTAGAGAAAGACTTGCTTATATATTTACCTCAAATAAAGAGGTTGCAGATGCTGTTGGGGATTTGTCACCTTTGTTGTCAATCTCTATACTTCTGAATAGTGTCCAACCTGTACTCTCAGGGGTTGCTATTGGAGCTGGGTGGCAAAGCATTGTAGCATATGTAAACATAGGGTGTTATTATGTTATAGGACTTCCTGTAGGAATTGTGCTTGGTAAAATAATTGATATGCAAGTCAAGGGAATCTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACTGTGGTGCTAATTATAATCACTTACAAAACTAATTGGGATGAACAGGTCACCATCGCTAGAAATAGTGTTAACAGATGGTCTAAGGTGGAGGGGACAGATCAAGAAACAAAAATAAATAGATCAGATAATTAG 1485 0.3704 MEVDPREKLLSTKETSKEEEEEEELSLVKRVLEESKLMWIVAAPAIFTRSSTFGINVITQAFVGHIGSRELAAFALVFTVLIRFVNGVLYGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLSLTAIILLPFFIFTTQILILLGQDESIAEVAGTISLWSIPIIFAYIVSFTCQTFLQSQSKNVIIAFLAAFSIIFHVCLSWLLVIKLNLGLPSALIATSLAYWIPNIGQLIFVTCGWCDQTWKGFSFLAFKELWAVVKLSISAGAMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSAKAAKFSIIVTVLTSLTIGFILFLFFLFFRERLAYIFTSNKEVADAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYVIGLPVGIVLGKIIDMQVKGIWIGMLFGTFVQTVVLIIITYKTNWDEQVTIARNSVNRWSKVEGTDQETKINRSDN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0533 494 Pfam MatE 267 426 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal10g0533 494 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal10g0533 494 PANTHER PROTEIN DETOXIFICATION 16 479 - -
Lal10g0533 494 MobiDBLite consensus disorder prediction 1 20 - -
Lal10g0533 494 CDD MATE_eukaryotic 34 467 IPR045069 GO:0042910|GO:1990961
Lal10g0533 494 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 479 - -
Lal10g0533 494 TIGRFAM matE: MATE efflux family protein 44 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0533 Lal-Chr10 12765839 12770383 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0533 K03327 - gmx:100792122 762.296