Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0524 ATGAGCGGCGCCGCCCCACGGTTGTTATTCCACCTCACCACTCCCTTCACACTTCTCCGCCACCACAAATTCATCCTCCTCTCTCCTTCCTTCTCCCATCTCCACCGTCTCTCTTTTTCTCATTCCTCACCTTCTCCTCTCAAACTCAAACCCTCCCAACACCACCATCACTTTCAAACCCATGCCTCATCCCTCACCTCTGAACCCTTCTATTCCGACTCTTCTCCATTCTTGCACCCTTGGTCTGAGTGGTCTGCATTCCTCCGCCACATCACCGCCACCGCCTCCGCTAATCAGACTGCCACGGAGGATGCCTTCGCAGCGCATTTCCAGTTGTCGAGGAGCTTCCTGTCCGAAGCTACTGCCTGCTTGGCCTTCGCTCGCCAGAGACCTAATCTTTTGCGGTTGCTTTCGATGAGAGATATTGCGGTTGTAGTTGAACATGGAACCCCTTTTCTGTTCCGTGACTCAGATGAATCTGTGAGGAAGATGAAATCTTTTGTGTCCAAAAGTGATGCCACTGTGTTGGACACTGATAGAGCAAATTTGGTTGATCTGATGAAGTTTATGCTGAGTTATGCAAGTAACCCATTGGTCTCTTCAGAAAGGAGTAATCTCTACAACAGAGATCTTGTTGAATCGTCTGTCAGAAATCTTTTTGGTGAACTTTTCAAGCTTAGTCATAGTGCACCTGGACCCAACTCTTCTGACGTAGTGCAAAATCAAATGCCTAGTAGATTTGGACAGACAATGCCTACTGGACCAAAAATTGAAATGAAAAGGGGAGATTGGATTTGCACAAGGTGCAATTTCATGAATTTTGCAAGAAATGTTAAATGTCTTGAATGTGAGGAAGCAAGGCCAAAAAGGCAGCTAGCTGGAGGAGAATGGGAATGTCCCCAGTGTGTTTTCTATAATTATGGGAGGAATGTAACTTGCTTAAGGTGTGATTGCAAGCGGCCTGGACAAATATCTTTTGGTGCCACGAATTCCGTGTCACATACGGGGTATGGAAATGGATACAACAATAATACTTCAGATGTTGACAGTAGGTTAGCTGCCAATGAAGAGAAGGCACAGCGTTGGTTTAGTAAGGTTTCTCAACTAGACAGTAATGCTGATATTAACAATGTGATAGCAGATGAAGATTTCCCTGAAATAATGCCATTAAGGAAAGGAGTAAACAGATTTGTTGTGAGCACTAGGAAAACTTCATTGGAGAGGAGGTTGGCCAATGCTCAATACAGGAGAAATTTGGGCAATGGTGGCACTCCCGGGGTTGAGGATTTTAAAGCTGGGGAGTCAACCAAGTCCAATGATAATGTGGATGACATTCTAGGTCGTTCAGCTGGCATTTCTCACAATACTAGCATAGGCGATGCAAGCACTGTTCCTCCAGTTACTTTGTCTGCAGATACGCTTGCCGAAAAGTCTGAGAACATAATAACAGAGGAGAGAAAAAGGGTGGTATTAGACACTGGTGTTGGATATGCTGGTTCAAGTGGCAGTTCACAACTTTCTAATAATTCTACAAGCCAAAACGTCATCAAAGATAAGGAGAAAGAGCAAGCTGAAAAATCTGAAAGGTGGTTTAAAAAGGTTGCTGAGCTGCATGATGTTTCAGATTTAACAAGTGCAATTTCTGATGAGGACTTCCCTGAAATAATGCCCATGCGTAAAGGAGAAAATCGATTTGTTGTTAGCAAGAAGAAGGATCGCTCTTTGACTTCACCTGCATATAAGAGACGTTTGGCCATGGAGCAAGCTGGCAATACCAACTTTGTCCCCTTTGTTCCCTTCCCCCCAAATTACTTTGGCAAAAAGGAAACACAACAAGCAGATGGAACAGATTCAGCAAACAGGTCCAATGTTGAATCATCTTCGATATCGGAGGTGGCAGAGAAGCCTCTAGAGATGTCAGATGATGCTAGAGCTGGACCTGGGTTCCCAAGTGCAGATTATGCCCAAGGTATGACCAATACCGAATCATCGTCTAGGGTTCCCGGCAACAACCCAAAGATGTTAGATGATTCAAAGCCTGGGTTGGAAAGAAGAGAAAGTGTAAAAGAAATTGGAAACCAATATATAAACATGAAGAGCTCGAATCCAAAACCTTCAGAACAGAGCTCAAGTAACAATAATGTAGGTTCTGTTTACGGGGCAACAACCAGTGGAAATTCAAATTCAAGCCAGAGTTTCATTCAAGAGGATTATAGTAATAAGTATTCCAGGAATGAGAATAATGACCATAAGCCGAAATTGACAGGGAATTCTTCCCCGTCATATGAGAACCAGAGTGTTAGAGCACAGTGGACAGGGAAGAGTTTGGAAGGATCAGCTGTGAAGGAACCTGATCCTCTGGACATGTCAGAGGAGGCGAAGGCAGAGAGGTGGTTCCGACGTGTTGCACAGATTAAGGATATCTCTGAGCTCAGTCAGATTCCCGATGAAGATTTTCCGTCAATAATGCCAATGCGAAAAGGGGTGAACAGATTTGTTGTGAGCAAGAGGAAAACACCATTGGAGAGGAGATTGACATCTCAGCAATACCGAAGAAATCTTCCAGTTGTGAGCTCAGAACCAGTTAAAAATGAAAATAATGAAGGTAGTTGA 2613 0.4413 MSGAAPRLLFHLTTPFTLLRHHKFILLSPSFSHLHRLSFSHSSPSPLKLKPSQHHHHFQTHASSLTSEPFYSDSSPFLHPWSEWSAFLRHITATASANQTATEDAFAAHFQLSRSFLSEATACLAFARQRPNLLRLLSMRDIAVVVEHGTPFLFRDSDESVRKMKSFVSKSDATVLDTDRANLVDLMKFMLSYASNPLVSSERSNLYNRDLVESSVRNLFGELFKLSHSAPGPNSSDVVQNQMPSRFGQTMPTGPKIEMKRGDWICTRCNFMNFARNVKCLECEEARPKRQLAGGEWECPQCVFYNYGRNVTCLRCDCKRPGQISFGATNSVSHTGYGNGYNNNTSDVDSRLAANEEKAQRWFSKVSQLDSNADINNVIADEDFPEIMPLRKGVNRFVVSTRKTSLERRLANAQYRRNLGNGGTPGVEDFKAGESTKSNDNVDDILGRSAGISHNTSIGDASTVPPVTLSADTLAEKSENIITEERKRVVLDTGVGYAGSSGSSQLSNNSTSQNVIKDKEKEQAEKSERWFKKVAELHDVSDLTSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTSPAYKRRLAMEQAGNTNFVPFVPFPPNYFGKKETQQADGTDSANRSNVESSSISEVAEKPLEMSDDARAGPGFPSADYAQGMTNTESSSRVPGNNPKMLDDSKPGLERRESVKEIGNQYINMKSSNPKPSEQSSSNNNVGSVYGATTSGNSNSSQSFIQEDYSNKYSRNENNDHKPKLTGNSSPSYENQSVRAQWTGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVSSEPVKNENNEGS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0524 870 MobiDBLite consensus disorder prediction 752 773 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 417 442 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 605 789 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 654 671 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 499 514 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 609 630 - -
Lal10g0524 870 SMART zf_4 262 286 IPR001876 -
Lal10g0524 870 SMART zf_4 295 319 IPR001876 -
Lal10g0524 870 ProSiteProfiles Zinc finger RanBP2 type profile. 293 322 IPR001876 -
Lal10g0524 870 PANTHER ZINC FINGER PROTEIN 3 868 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 499 522 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 693 741 - -
Lal10g0524 870 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 3 868 - -
Lal10g0524 870 Gene3D - 253 290 - -
Lal10g0524 870 Gene3D - 291 323 - -
Lal10g0524 870 MobiDBLite consensus disorder prediction 843 870 - -
Lal10g0524 870 SUPERFAMILY Ran binding protein zinc finger-like 255 289 IPR036443 -
Lal10g0524 870 ProSitePatterns Zinc finger RanBP2-type signature. 264 283 IPR001876 -
Lal10g0524 870 Pfam Zn-finger in Ran binding protein and others 261 288 IPR001876 -
Lal10g0524 870 Pfam Zn-finger in Ran binding protein and others 295 321 IPR001876 -
Lal10g0524 870 ProSitePatterns Zinc finger RanBP2-type signature. 297 316 IPR001876 -
Lal10g0524 870 ProSiteProfiles Zinc finger RanBP2 type profile. 260 289 IPR001876 -
Lal10g0524 870 MobiDBLite consensus disorder prediction 846 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0524 Lal-Chr10 12621800 12628505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0524 77 322 EF-hand Containing Proteins AT1G55040 33.447 1.38e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0524 - - aprc:113861495 1044.65