Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0523 ATGGCCTCTAATCTGCTTTGGCGTAGAAGGCTTTTCAGGTTCTTGCAACAGTCACTACCGTCATGTCCACATTTACACTCTTCTCCGATTCATGGGCCCCCAATTCTCTCTGTAAAAGCATCAGAAATTGTGTGTCTCTCGCCGCACAAGTCCCATCTTCCTGCTCTCAAGTCTTCTAGAAGCTTATGTTCTCGCATTTCAAATCTTGTAGATGAATCTCAAGGCCCCACGGCTATCGATTACCGTTCTTTACTGCAGGAAGGTGACTTTCACAGACTGGCTGATTCCACAATACATAGCCTACAAGAGAAACTTGAGGACTATGGAGACTCTGTTGAAGTTGATGGATTTGACATAGACTACGGGAATGACGTTTTAACTATAAAACTTGGCGATCTTGGTACCTACGTACTGAACAAACAGACACCAAATAGACAACTTTGGCTGTCTTCTCCAGTGAGTGGTCCTTCAAGATTTGATTGGGATCAAGATGCTAAAGCTTGGGTTTATAGGCGCAACAAAACAAACTTGTACAAAGTTTTAGAAAGTGAGTTGGAGCAGCTGTGTGGCAAACCTATTGTTCTTTCCTAA 591 0.4315 MASNLLWRRRLFRFLQQSLPSCPHLHSSPIHGPPILSVKASEIVCLSPHKSHLPALKSSRSLCSRISNLVDESQGPTAIDYRSLLQEGDFHRLADSTIHSLQEKLEDYGDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQDAKAWVYRRNKTNLYKVLESELEQLCGKPIVLS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0523 196 SUPERFAMILY Frataxin/Nqo15-like 75 193 IPR036524 GO:0008199|GO:0016226
Lal10g0523 196 ProSiteProfiles Frataxin family profile. 85 193 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 PANTHER FRATAXIN 50 194 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 SMART Frataxin_Cyay_2 85 196 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 TIGRFAM FeS_CyaY: iron donor protein CyaY 87 194 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 ProSitePatterns Frataxin family signature. 137 151 IPR020895 -
Lal10g0523 196 Gene3D Frataxin/CyaY 77 196 IPR036524 GO:0008199|GO:0016226
Lal10g0523 196 CDD Frataxin 85 193 - -
Lal10g0523 196 PRINTS Frataxin signature 85 103 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 PRINTS Frataxin signature 123 138 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 PRINTS Frataxin signature 138 153 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 Pfam Frataxin-like domain 86 192 IPR002908 GO:0008199|GO:0016226
Lal10g0523 196 TIGRFAM mito_frataxin: frataxin 90 186 IPR017789 GO:0004322|GO:0005739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0523 K19054 - gmx:100815916 280.411