Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0486 ATGGGTGTTTCGGTTGATTCACAAGCACAAGAGGGTGCATGGAGTTCTTTGAGATTCTTGACTAGAAGGAAACAAGTGGATTCATCACGTAGGAAAACTCAGGGTCTCCTTGCAAAAGAATTATCTATTCTTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTCTGGTTGGAACAGTTGCTCTAGAGCATACAGGACCGGCTTTGCCCATTTCATTTTTGATTGCTGGAATAGCAGCTGGTCTTTCGGCCTTTTGCTATGCCGAGTTGGCTAGTCGTTGCCCTTCTGCCGGGAGTGCATATCACTATTCATACATATGTCTTGGGGAAGGTGTTGCTTGGTTGATTGGTTGGTCCTTGTTATTGGAGTATACAATTGGTAGTGCTGCTGTTGCTCGTGGCGTATCCCCCAATTTGGCTGCTTTTTTTGGAGGTCCAAATAGTTTACCCTACTTTTTGTCGCGCCAACATATTCCTGGGACCGATGTTGTTGTGGACCCTTGCGCAGCAATCTTGGTATTTATTGTTGCGGGACTCTTGTGTTGGGGGATCAAGGAGAGTACAGTGGTACAAGGCGTAGTCACATTAATGAATGTATGTGCTTTGCTTTTTGTCGTAGCAGCCGGTGGTTACTTGGGGTTCAAGTCTGGATGGAATGGATACGGACTTCCTTCGGGGTATCTTCCCTATGGGGTTCACGGGGTGGTTGCTGGGTCTGCAACAGTGTTCTTTGCGTATATAGGTTTTGATGCAATTGCTAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAGATTTGCCATTGGGCATTGGTGGTGCGCTGTTTCTTTGTTGCGGATTGTACATGATAATCTCTATAGTTGTTGTTGGTTTAGTGCCTTATTATGCAATTAACCCTGACACCCCGATATCATCTGCATTTTCTGAGCATGGGATGCAATGGGCTGGTTACATTATAAATCTTGGAGCTTTTACAGCTCTCTGCTCTGCATTGATGGGTGGGATTCTTCCCCAGCCTCGAATTTTGATGTCTATGGCAAGGGATGGACTGCTGCCACAATTTTTTTCGGACATAAATAAGCACACTCATGTCCCTGTTAAGGGCACAATAGCTACTGGCCTCGCGTCTGCAGTTTTGTCATTTTTTATGGAAGTCTCTGAACTTGCAGGCATGGTTAGTGTTGGCACACTTCTAGCTTTCAGTATGGTGGCGATATCCGTGTTGATACTTAGATATATCCCTCCCAATAAAGTCCCATTGCCTCCGTCTCTCGAGGACTCAATTGCTACCGTGTCTATGCGGTATAGTTTGATCAGCGAAGAAGCAAATGTTGGAACTTCCGGGGACACAAAACCTTTACTTGTCAAGGAAGATTTACATGAGGGTAATAGGCGAAAAGTTGTTGGGAGGATAATAGCACTCACATGCTTAGGGGCAGTTTTCCTCACATATGCAGCTTCAAATTTAACTCATTTTAGTTCTATTCGCTACACCTTGTATGGAGTTGGAAGCATTCTTCTTTTGTCTGGCCTTGTCTTCCTAACTTGTATAGATCAAGATGATGCAAGGCACAACTTTGGGCACTCTGGAGGTTTCCTTTGCCCATTTGTGCCACTGCTGCCCATAGCCTGTGTTCTCATCAATTCCTATTTACTTATTAATCTTGGAGTTAGTACATGGTTGCGCGTTTCTGTATGGTTGTTAGCAGGATTACTAGTGTATGTATTTTATGGAAGAACTCATAGTTCTCTAAAAGATGCAATTTATGTTCCAGCAACACAAGTAGAAGAAATCTATCAGATAAAGACATGA 1830 0.4393 MGVSVDSQAQEGAWSSLRFLTRRKQVDSSRRKTQGLLAKELSILHLIAVGVGSTIGAGVYVLVGTVALEHTGPALPISFLIAGIAAGLSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWSLLLEYTIGSAAVARGVSPNLAAFFGGPNSLPYFLSRQHIPGTDVVVDPCAAILVFIVAGLLCWGIKESTVVQGVVTLMNVCALLFVVAAGGYLGFKSGWNGYGLPSGYLPYGVHGVVAGSATVFFAYIGFDAIASTAEEVKNPQRDLPLGIGGALFLCCGLYMIISIVVVGLVPYYAINPDTPISSAFSEHGMQWAGYIINLGAFTALCSALMGGILPQPRILMSMARDGLLPQFFSDINKHTHVPVKGTIATGLASAVLSFFMEVSELAGMVSVGTLLAFSMVAISVLILRYIPPNKVPLPPSLEDSIATVSMRYSLISEEANVGTSGDTKPLLVKEDLHEGNRRKVVGRIIALTCLGAVFLTYAASNLTHFSSIRYTLYGVGSILLLSGLVFLTCIDQDDARHNFGHSGGFLCPFVPLLPIACVLINSYLLINLGVSTWLRVSVWLLAGLLVYVFYGRTHSSLKDAIYVPATQVEEIYQIKT 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0486 609 PANTHER PROTEIN, PUTATIVE-RELATED 12 602 - -
Lal10g0486 609 PIRSF AA_transporter 16 427 - -
Lal10g0486 609 PIRSF AA_transporter 467 602 - -
Lal10g0486 609 Gene3D Amino acid/polyamine transporter I 37 443 - -
Lal10g0486 609 Gene3D Amino acid/polyamine transporter I 462 602 - -
Lal10g0486 609 Pfam Amino acid permease 41 423 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal10g0486 609 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 602 - -
Lal10g0486 609 Pfam C-terminus of AA_permease 538 588 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0486 Lal-Chr10 11381660 11389591 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0486 17 606 Organic Solute Cotransporters AT5G36940 64.157 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0486 K13863 - gmx:100784895 942.569