Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0482 ATGATAGCAAGGGATGAAAATGGTGGAGTTAGAGTTGGAGGAAGAAAATGGTTAAGGGGATTTGGAAGTTTGATTAGGAGGAAACAAGTTGATTCTGTTCATATCAATGGCCATGGTCATCAATTAGCTAGAACGTTATCTATTATTGATCTTGTTGCAATTGGGGTTGGATCTACCATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCTAGAGAGCAAGCTGGACCAGCAATTGTGATATCACTTCTCATTGCGGGAATAGCTGCTGCACTATCAGCTTTTTGCTATGCCGAGCTTGCATGTCGATGCCCATCTGCAGGAAGTGCTTATCATTATACATACATATGCATTGGAGAAGGAGTTGCATGGTTGGTTGGTTGGGCCCTCATTCTAGAATATACAATTGGCGGTTCAGCTGTTGCTCGTGGTATAACCCCAAATCTGGCCTTGTTTTTCGGTGGTGAGGACAACCTACCTTCATTTTTAGCTCGACATACTTTACCAGGTCTTGGAGTTGTTGTTGATCCGTGTGCAGCTGTATTAGTTCTTCTTGTCACCATACTCCTGTGTCTTGGAATCAAGGAGAGTTCAACGGCACAATTTATAGTTACAACGGTAAATGTCTGTGTCATGCTTTTTGTCATTATAGTTGGTGGATATCAATGTTTCAAGTCTGGATGGGTTGGATATGAACTCCCCAGCGGGTATTTTCCATATGGAGTAAATGGAATTTTTGCTGGGTCTGCAATAGTTTTCTTTTCGTACATTGGTTTTGATGCAGTGACTAGCACAGCCGAGGAGGTAAAGAACCCTCAAAGAGATTTGCCTCTTGGCATATCAACTGCATTATGTATTTGTTGCGTTCTGTATATGTTTGTTTCAGCAGTTATTGTTGGCTTAGTACCATACTATGAGTTGAATCCGGATACGCCAATCTCCTCAGCATTTTCTAGCTACGGAATGGATTGGGCAGTGTATTTAATAACAACTGGATCCATCACTGCTCTGTTTTCCAGTTTGTTGGGATCAATTCTTCCTCAGCCACGGATCTTTATGGCAATGGCAAGGGATGGTTTGTTGCCATCTTTCTTTTCAGACATCAATAGACGTACGCAGGTTCCATTGAAAAGCACTATTGTCACCGGTATCTTTGCAGCTGTTCTAGCATTCTTCCTGGATGTTTCGCAATTAGCCGGGATGGTTAGCGTGGGAACTTTGTTAGCATTTATCACCGTTGCAGTTTCGGTTTTGATAATCAGATATGTCCCACCCGATGAGATACCTATTCCATCTTCACTTCAAACATCTATTGACCGATTAGTGAGCCGTTCGGGTGGTTATATTGAGGAAGACCAGGCCATAAGTCCTGTTGATCCTGCTAGTTATTGTGAAAATAGTCACCTACATGACAAGTCAGAAGCTTTGCTTGGACATCCTTTAATCATAAAAGAAGTAACCAATGATGAACAAAATGAGAAAAATAGGCGGAAACTTGCTTCATGGGCCATAGTCCTCCTATGTGTAGGGATTCTCATACTTGCAGGTGCAGCTTCAGCGGACAGGTGTCCCAGCATTTTGCGCTTCACATTGTGCGGAATGGGTGGAATTCTTCTTTTGTGCAGTATAACTGTGCTGGCCTGCATGAAGCAAGATGATACAAGGCACAGTTTTGGACATTCAGGAGGTTTTGTTTGCCCATTTGTTCCATTCTTACCAGCTGCTTGCATTCTTCTAAATACCTACTTACTAATTGGTCTTGGCGCGGCTACATGGCTACGAGTTTCGGTGTGGTTGTTGATCGGAGTACTTGTATACTTGTTCTATGGCCGCAATCACAGCACATTGTTAAATGCAATTTATGTTCCTTCAGCATGTGCGGATGAGATTCATCGCTCTCAAGCATATCATCTACTCTAG 1923 0.4259 MIARDENGGVRVGGRKWLRGFGSLIRRKQVDSVHINGHGHQLARTLSIIDLVAIGVGSTIGAGVYILIGTVAREQAGPAIVISLLIAGIAAALSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWALILEYTIGGSAVARGITPNLALFFGGEDNLPSFLARHTLPGLGVVVDPCAAVLVLLVTILLCLGIKESSTAQFIVTTVNVCVMLFVIIVGGYQCFKSGWVGYELPSGYFPYGVNGIFAGSAIVFFSYIGFDAVTSTAEEVKNPQRDLPLGISTALCICCVLYMFVSAVIVGLVPYYELNPDTPISSAFSSYGMDWAVYLITTGSITALFSSLLGSILPQPRIFMAMARDGLLPSFFSDINRRTQVPLKSTIVTGIFAAVLAFFLDVSQLAGMVSVGTLLAFITVAVSVLIIRYVPPDEIPIPSSLQTSIDRLVSRSGGYIEEDQAISPVDPASYCENSHLHDKSEALLGHPLIIKEVTNDEQNEKNRRKLASWAIVLLCVGILILAGAASADRCPSILRFTLCGMGGILLLCSITVLACMKQDDTRHSFGHSGGFVCPFVPFLPAACILLNTYLLIGLGAATWLRVSVWLLIGVLVYLFYGRNHSTLLNAIYVPSACADEIHRSQAYHLL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0482 640 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 18 633 - -
Lal10g0482 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Lal10g0482 640 PIRSF AA_transporter 490 619 - -
Lal10g0482 640 PIRSF AA_transporter 27 430 - -
Lal10g0482 640 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal10g0482 640 Gene3D Amino acid/polyamine transporter I 42 439 - -
Lal10g0482 640 Gene3D Amino acid/polyamine transporter I 489 626 - -
Lal10g0482 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 18 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0482 Lal-Chr10 11330487 11338173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0482 23 625 Organic Solute Cotransporters AT3G03720 65.785 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0482 K13863 - gmx:100810218 1061.21