Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0462 ATGCAGACGAGGACGGTTCAAGTGAAGCAACTTTCAGATCTAGCTAGTGAGAGAGAGATTCATGAGTTCTTTTCTTTTTCAGGAGAAATTGATCACATTGAAATTCTAAATGAACATGGGAAGTCAAAGACTGCATTTGTCACATTTAAAGACCCCAGAGCACTTGAAATTGCATTATATTTATCAGTATTGTCTCTTCTTTTTTTATTCTTTTTAAGAGGAGTTGTGGGAGCAACAATAGTAGACCAGATTGTGAGTATAACTCCAGCTGAGAACTATGTACCAAATCGTGACACACAGGAAGTGAGGGTGGTGGAAAATGCCGTAAGTGTTTTTCCTTCTGAAAATGTCTCATTGAATAGTGAAGACGAGAAAGCCAGCCCCACCAATGGAGGAGTGTACATCAGTAAAGCTCAAGATGTAGTTACGAATATGCTGGCAAAAGGTTCGGCAATAAAGCAAGATGCCGTGAACAAAGCTAAAGCATTTGATGAAAAGCATCAGTTGACCGCTAATGCATCTGCAAAGGTTGTTTCTTTCGACAAGAGAGTTGGACTGACAGAGAAGCTGACTATTGGCATTTCTGTAATGAAAGAGAAAGTGAAGTCCGTGGATGAGAGGCTCCATGTTTCAGATAAAACAATGGCAGCTATATTCGCAGCTGAAAGGAAGTTGAATAATACTGGATCAGCCGTCAAAACAAGCAGATATGTGACTGCCGGAACATCATGGTTAAACGATGCTTTTGGCAAGGTATCACGGGCTGGACATGTCGCTGGTACTAAAACTAGAGAAAAGTTTCATTTGGCTTTTTCAAACTTGACAATGAAGGAACCTTTGGCTGCTGCATAG 852 0.4061 MQTRTVQVKQLSDLASEREIHEFFSFSGEIDHIEILNEHGKSKTAFVTFKDPRALEIALYLSVLSLLFLFFLRGVVGATIVDQIVSITPAENYVPNRDTQEVRVVENAVSVFPSENVSLNSEDEKASPTNGGVYISKAQDVVTNMLAKGSAIKQDAVNKAKAFDEKHQLTANASAKVVSFDKRVGLTEKLTIGISVMKEKVKSVDERLHVSDKTMAAIFAAERKLNNTGSAVKTSRYVTAGTSWLNDAFGKVSRAGHVAGTKTREKFHLAFSNLTMKEPLAAA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0462 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 92 IPR000504 GO:0003723
Lal10g0462 283 SMART rrm1_1 5 70 IPR000504 GO:0003723
Lal10g0462 283 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 279 - -
Lal10g0462 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 59 IPR000504 GO:0003723
Lal10g0462 283 Gene3D - 1 64 IPR012677 -
Lal10g0462 283 SUPERFAMILY RNA-binding domain, RBD 2 60 IPR035979 GO:0003676
Lal10g0462 283 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0462 Lal-Chr10 10887059 10890628 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0462 - - gmx:100779011 406.757