Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0455 ATGGCCACCGATCCAACTCAGCAACAGCAACTCGTCCTAATCTTAGGCCCTGACCTGTCCCACTTAGAATCCCTAATCTCAAACCTCATGTCCTCCACCAACGACCAACGCTCCTACGCCGAGTCCCTTTTCAACCTCTCCAAACAAACCCACCCTGACCCACTCTTTCTCAACCTCTCCAACCTCCTCCGCTCCCTCAACCCTGAAACACGCACCATATCCGCCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGATGACTCCACGTCATCCTCTTTTATATATCCACACCTTTCCCTCTCAACTCGCTCTTCTATCAAATCACTCCTTCTCTCTTCTCTCCACGCTGAACCAATCAAATCCATCACTAAGAAACTATGCGACACCGTTTCGGAACTCGCTGCTTCGATTCTACCCGATAATGATTGGCCTGAACTCCTTCCTCTCTTGTTCCAATACGTTACTTCTGATGATAACCGCTTACAAGAGAATTCTCTCTTGATTTTGGCTCAACTCGCTCATTACTTATCCGAAACCCTAATCCCTTATTTATCGACTTTGCATGATGTTTTCCTTCGGTGCCTGACCGGTTCGAGTTCCGATGTTAGAATCGCGGCGCTGGCCGCGAGCATTAATTTTGTCCAGTGTTTGTCGAGTTCCACTGATAGGGACAGGTTTCAGGATTTGTTGCCTCTGATGATGCAGACGCTCACGGAGGCGTTGAATTCTGGCTTGGAGGCCACTGCGCAGGAGGCGCTCGAGTTGCTTATTGAGCTTGCTGGGACTGAGCCGAGGTTCTTGCGGAGGCAGATTGTGGATGTGGTTGGGTCCATGTTGCAGATTGCGGAGGCGGAGTCCTTGGAGGAAGGGACGAGGCACTTGGCAATTGAGTTTGTTGTGACATTGGCTGAAGCGAGGGAGCGCGCCCCTGGGATGATGAGGAAGTTGCCGCAGTTTGTGAAGAGGTTGTTTGATGTATCGATGAATTTGTTGCTGGACGTTGAGGATGATCCTGCGTGGCATAGCGCGGAGACGGAGGATGAGGATGCTGGCGAGACTAGCAACTATGTTTTTGGAGAGGAGTGTTTGGATAGGCTTTCCATTGCATTAGGTGGGAACACAATTGTGCCGGTTGCTTCGGAGGTGTTGCAGACTTTCTTGGCTGCCCCTGAGTGGCAAAAGCACCATGCTGCACTCATTGCACTTGCACAAATTGCTGAGGGTTCTTCAAAGATGATGATAAAGAATCTCGAGCAGGTGTTGTCAATGATTTTAAGTTCATTTCACAATGCTCATCCCCGTGTGCGGTGGGCTGCTATAAATGCAGTTGGGCAATTGTCAACAGATTTGGGGCCAGATTTGCAGGTTAAATATCACCACTTAGTCCTCCCAGCATTAGCTGGCGCCGTTGACGATTTCCAGAATCCTCGTGTACAGGCTCATGCCGCTTCTGCGATGCTAAATTTCACTGAGAATTGTACCGCAGATATCCTAACACCTTACTTAGATGGGCTTGTGAGCAAACTTCTTGTACTCCTGCAGAATGGGAAGCAAATGGTTCAAGAAGCGGCCTTAACAGCTTTAGCATCAATTGCTGATTCATCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATACCTTTCTTAAAAGCTATTTTGATGAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCACCAATCTCAATTGGAGTCTGATGATCCAACAACAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTCCTCCCATATATGGGCTTTGTCATGCCTCGTTTGCTTCAGTCTGCACAACTTAAGCCTGATGTGACCATTACATCTGCGGATTCAGATGCTGAATTTGATGAAGATGATGACAGCATCGAAACAATCACTCTTGGGGATAAAAGGATTGGCATTAAGACCAGTGTCCTGGAGGAGAAGGCTACAGCGTGTAACATGCTCTGTTGCTACGCTGATGAGTTGAAAGAAGGGTTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCTATGCCGCAACTGTTGTCCTCAGCGAAATCAGCTGTAGAGAAGGGAACATCACAAGGGCGTGACGGGAGTTACATAAAGCAGCTCTCTGATTATATAATACCAAATTTGGTGGAGGCGTTACACAAGGAGCCAGAGGTAGAAATTTGTGCAAGCATGTTGGACACATTGAACGAATGCATACAGGTCTCCGGAACACATCTAGATGAAAAGCAAGTGCGGAGCATTGTTGACGAGATTAAGCAAGTCATTACAGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCCAAGGAAGAAGACTTTGATGCTGAAGAAAGAGAACTGCTTACGGAAGAAAATGAACAAGAGGAAGAACTTTTTGATCAAGTTGGTGATTGCTTGGGGACTTTGGTAAAAACATTTAGAGCATCTTTCTTGCCTTTCTTTGATGAGTTTTCCTCATACCTAACACCAATGCTTGGTAAAGGTAGTACCTCAGAGGAAAGGAGAATTGCTATTTGTGTATTTGATGATGTTGCTGAGCACTGTCGTGAAGCAGCTCTAAAATATTATGATTCTTACCTACCATTCATACTTGAAGCTTGCAATGATGAATATCCTGATGTTCGGCAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCTCTTGTTGGAGAGTCCCTTTCAAGGTTAGATGCTGTCATAAGGCATCCAAATGCACTGAACTCTGAAAATATAATGGCATATGACAATGCTGTTTCAGCTCTCGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAACACAGGTTGTTCCTGCATGGCTTGGTTGCTTGCCATTAAAAGGTGATTTGATTGAGGCTAAGGTTGTGCATGACCAACTCTGTTCCATGGTTGAAAGGTCAGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATAGTTGCAGTTTTTGCCGAGATTTTATGCGCGGGTAACAATCTTGCAACCGAACAAACTGCTGGTCGGATGGTTAATCTACTTAGGCAGCTTCAGCAGACTTTGCCGCCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCACAGCAGCAGCTTGCACTTCAGTCAATTCTATCATCATAG 3354 0.4609 MATDPTQQQQLVLILGPDLSHLESLISNLMSSTNDQRSYAESLFNLSKQTHPDPLFLNLSNLLRSLNPETRTISAILLRRHLTRHHDDSTSSSFIYPHLSLSTRSSIKSLLLSSLHAEPIKSITKKLCDTVSELAASILPDNDWPELLPLLFQYVTSDDNRLQENSLLILAQLAHYLSETLIPYLSTLHDVFLRCLTGSSSDVRIAALAASINFVQCLSSSTDRDRFQDLLPLMMQTLTEALNSGLEATAQEALELLIELAGTEPRFLRRQIVDVVGSMLQIAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVKRLFDVSMNLLLDVEDDPAWHSAETEDEDAGETSNYVFGEECLDRLSIALGGNTIVPVASEVLQTFLAAPEWQKHHAALIALAQIAEGSSKMMIKNLEQVLSMILSSFHNAHPRVRWAAINAVGQLSTDLGPDLQVKYHHLVLPALAGAVDDFQNPRVQAHAASAMLNFTENCTADILTPYLDGLVSKLLVLLQNGKQMVQEAALTALASIADSSQEQFQKYYDAVIPFLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLHQSQLESDDPTTSYMLQAWARLCKCLGQDFLPYMGFVMPRLLQSAQLKPDVTITSADSDAEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPQLLSSAKSAVEKGTSQGRDGSYIKQLSDYIIPNLVEALHKEPEVEICASMLDTLNECIQVSGTHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLTEENEQEEELFDQVGDCLGTLVKTFRASFLPFFDEFSSYLTPMLGKGSTSEERRIAICVFDDVAEHCREAALKYYDSYLPFILEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGESLSRLDAVIRHPNALNSENIMAYDNAVSALGKICQFHRDSINATQVVPAWLGCLPLKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNNLATEQTAGRMVNLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0455 1117 ProSiteProfiles Importin-beta N-terminal domain profile. 40 117 IPR001494 GO:0006886|GO:0031267
Lal10g0455 1117 SUPERFAMILY ARM repeat 21 956 IPR016024 -
Lal10g0455 1117 Pfam HEAT repeat 926 953 IPR000357 GO:0005515
Lal10g0455 1117 Pfam Importin repeat 6 786 891 IPR041389 -
Lal10g0455 1117 Coils Coil 832 852 - -
Lal10g0455 1117 Pfam Interferon-related developmental regulator (IFRD) 490 626 IPR007701 -
Lal10g0455 1117 SMART TOG_3 362 611 IPR034085 -
Lal10g0455 1117 PANTHER IMPORTIN BETA 18 1116 IPR040122 GO:0006606
Lal10g0455 1117 Pfam Importin repeat 287 378 IPR041653 -
Lal10g0455 1117 Gene3D - 19 1116 IPR011989 -
Lal10g0455 1117 PANTHER BNAC09G37860D PROTEIN 18 1116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0455 Lal-Chr10 10752733 10764317 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0455 K20222 - gmx:100780183 1798.48