Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0426 ATGAGACCCCCAAGAGGCGGCGGCCGCGGCGGCGGTTTCAGAGGTGGTAGAGACGGCGGTTTCAGAGGCGGTAGAGACGGTGGTTTCAGAGGCAGAGGCGGTGGCCGTTTCGGCGGTGGTGGCCGCGGTGGTGGCTTTCGCGATGAAGGACCACCCTCTGAAGTCGTAGAGGTGTCAACGTTTCTGCATGCATGTGAGGGAGATGCAGTAACAAAGCTTACTAATGAGAAGATTCCCTTTTTTAATGCTCCTATATATCTGCAAAACATGACTCAGATTGGTAAAGTTGATGAAATATTTGGTCCCATCAATGAATCTTTCTTTTCGGTTAAAATGATGGAAGGGATTGTTGCTAATTCGTATTCATCTGGTGACAAGTTCTATATTGACCCGAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAGCCAAAGGGACAAGCACAAGCTGGTGGAGGCAGAGGAGGTCGTGGTGGAGGAAGAGGAGGTTTTCGTGGAGGTGGTGGTTTTCGTGGAAGGGGTGGCCCAAGGGGTGGGAGAGGTGGCCCTCCTAGAGGTGGTGGACGTGGTGGTGGTTTCAGGGGAAGGGGGAGATTCTAG 600 0.5233 MRPPRGGGRGGGFRGGRDGGFRGGRDGGFRGRGGGRFGGGGRGGGFRDEGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESFFSVKMMEGIVANSYSSGDKFYIDPRKLLPLARFLPQPKGQAQAGGGRGGRGGGRGGFRGGGGFRGRGGPRGGRGGPPRGGGRGGGFRGRGRF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0426 199 Pfam Gar1/Naf1 RNA binding region 55 141 IPR007504 GO:0001522|GO:0042254
Lal10g0426 199 Gene3D Probable tRNA pseudouridine synthase domain 51 142 IPR038664 -
Lal10g0426 199 MobiDBLite consensus disorder prediction 1 52 - -
Lal10g0426 199 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 198 - -
Lal10g0426 199 MobiDBLite consensus disorder prediction 143 199 - -
Lal10g0426 199 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 198 - -
Lal10g0426 199 SUPERFAMILY Translation proteins 56 130 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0426 Lal-Chr10 10364608 10366933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0426 K11128 - gmx:100788981 210.305