Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0397 ATGGCTGAGATTTTAGCTAAAACAACGTTTGTTTTTTCATCTTGGCGTGAGAATAGACAACACTATAGTCAAAAGGTCTCATCCATGGTTTCTCATGTTCTCAGATCTTCATCATTTTCATCAGATTTTCGTGGCAAAAAACTTGTCTTTCGTGTCAATAGAGCAATACCCAACAAAGTCAACTCACAATTTCAAACTTCAACTCTATCTCAGATGTCCTTTAGAATAGGGAAAGCTTATAAATGGTGGGAAAAAGGGCTTCAATCCAACATGAGAGAAGTGACTTCAGCACAAGACCTAGTAGACTCACTATTAATGGCAGGGGACAAGTTAGTGGTTGTTGATTTCTTCTCTCCTGGTTGTGGTGGATGTAAAGCTCTTCATCCTAAGATATGTCAACTGGCAGAGATGAATCCTGTTATTCAGTTCCTTCAGGTGAACTATGAGGAGCATAAATCTATGTGTTATAGCCTTAATGTCCATGTTCTTCCCTTCTTCCGGTTCTACAGAGGGGCAAATGGTCGTTTATGCAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACACTCCAGATAGAAGCAGCTTGGGCCCAACCAAAGGGTTAGAGGAAAAAGAGCTCCTAGCTCTATCTGCCAACAAAGATCTTTCCTTCACATACAAACCGAAATCAGTTGAACCTGCCCTTTCCCTAGAACTTGAAGTGTCGGCCGCCGAAGCAGCACGGGCTCTTCCTTTATCAGAGCCTCTTCCTTTACCTGTATTGACCCCCAATTCTGTTATCTCCAAAGAGAGAACCCTGGCCACTGCTGGGATATGA 840 0.4262 MAEILAKTTFVFSSWRENRQHYSQKVSSMVSHVLRSSSFSSDFRGKKLVFRVNRAIPNKVNSQFQTSTLSQMSFRIGKAYKWWEKGLQSNMREVTSAQDLVDSLLMAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPVIQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGANGRLCSFSCTNATIKKFKDALAKHTPDRSSLGPTKGLEEKELLALSANKDLSFTYKPKSVEPALSLELEVSAAEAARALPLSEPLPLPVLTPNSVISKERTLATAGI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0397 279 SUPERFAMILY Thioredoxin-like 81 196 IPR036249 -
Lal10g0397 279 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 18 277 - -
Lal10g0397 279 CDD TRX_family 105 171 - -
Lal10g0397 279 Gene3D Glutaredoxin 82 196 - -
Lal10g0397 279 Pfam Thioredoxin 102 173 IPR013766 -
Lal10g0397 279 ProSiteProfiles Thioredoxin domain profile. 58 198 IPR013766 -
Lal10g0397 279 PANTHER THIOREDOXIN, MITOCHONDRIAL 18 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0397 Lal-Chr10 9798183 9801483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0397 - - gmx:100816892 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1042 8 8325795 8328352 Lal10g0397 10 9798183 9801483 LSH