Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0182 ATGGCTGACGCTAAAGATTCTTTTATGGTGGATGTTAAACCTTCAAAAACTCCATTAACACAAATCTCAAACAAACAACATAGATCTCTATTCATGATTCAAAACATCCTCAGAATCTTAGTCATTGTCTTTTCAGCAGTTTCAATTGCAGTTATGGTTACCAATAACCAAATCGTTGTTATCTTCACAATTCCATTTGAAGCCCATTTTTATTATTCTTCATCCCTCAAATTCTTGGTTGCTGCAAATGGTGTAATCTGTGTGTTCTCTGTGTTCACACTGATAATAAACTTTTTGCTAAGATCACAAGTACCACATCGAAAACACTACTTTTTCTTCCTATTTGTTCTTGATATAGTGATGACAGTGTTATTGATATCTGGTTGTGCAGCTGCAACAGCCATTGGATATGTGGGACAGTTTGGAGAGAAACATGTTGGATGGTTACCAATTTGTAACCATGTTGGTAAGTTTTGCAAAACAAACATGGTTTCTCTATTCTTTTCATATTTGGCTTTTTTTTCCAATTTTGGACTCACTATTTTAATTGCTTACAATTTCATCTTATCTTCTTCTAAGAATGAATCTGGATAG 594 0.3384 MADAKDSFMVDVKPSKTPLTQISNKQHRSLFMIQNILRILVIVFSAVSIAVMVTNNQIVVIFTIPFEAHFYYSSSLKFLVAANGVICVFSVFTLIINFLLRSQVPHRKHYFFFLFVLDIVMTVLLISGCAAATAIGYVGQFGEKHVGWLPICNHVGKFCKTNMVSLFFSYLAFFSNFGLTILIAYNFILSSSKNESG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0182 197 Pfam Casparian strip membrane protein domain 30 174 IPR006702 -
Lal10g0182 197 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 4 190 - -
Lal10g0182 197 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 36 184 IPR006459 -
Lal10g0182 197 PANTHER CASP-LIKE PROTEIN 1F2 4 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0182 Lal-Chr10 2231029 2233242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0182 36 160 Miscellaneous Gene Families AT3G16300 25.758 5.58e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0182 - - lang:109343531 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0182 10 2231029 2233242 Lal10g0182 10 2231029 2233242 ECH