Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0175 ATGAAGTCGTCGCTAAACAAATTGAAGAGAATCGCACTTCCGAAGAGTGTTGTGAAAGATAAGAAGAAGTTTCAGCAATCTACAAAGTTCGATGAACTTGCTCTTGCTGCTAAGGACATGCAGGAGATGAGAGATTGCTATGATAGCCTGCTTGCTGCTGCCGCTGCTACGGAGAACAGTGCTTATGAATTTGCAGAGTCACTGGGAGAAATGGGCAATTGTCTTTTGGAGAAAACAACCTTAAATGAAGATGAAGAAAGTGGTGAGTGCCGTTCTCACATCATACAGACAATAACCAACCCATCAGAGTCTCTTCTCAATGAAATAAGAACTGTTGAGGCTCTACTATATGATATTAGGTTTGTTGGGGCATTGTATGTAAGGGATTTGAAAGTTCTTATTAGAAAGAAGGAGAATGACAACAGTGGCATTTGGACCCTTGACATGAAGCGGCAATGTGATGAAAAAAGAGATGTCTATGAATACATGATTGGCCAACATAAAGAAAAAGGAAGGTCGAAAAGTGGTAAAGGTGAAAGTATCACTTCACAGCAGTTGCAAGGAGCTCATGATGCATATGAAGAGGAAGCAACACTCTGTGTTTTCCGATTAAAATCCCTGAAGCAAGGCCAATCACGTAGTTTCCTGACACAGGCAGCTCGTCACTATGCTGCTCAGTTGAACTTCTTCCGGAAGGGACTTAAATCACTGGAGGCTGTTGAACCACACGTTAGGGTGGTTGCTGAACAGCAGCATATTGATTACCAATTCAGTAGCCTTGAAGAAGATGATGTTAAAGATGGTTATGATGATGATGATGATGATGAGAAGGACTATGAAACCAATGAAGGTGGTGAATTGAGTTTTGACTATAGATCAAATAAGCAGGGGCCTGATATTGTTTCCACATCACCAAACTCAACAGAGTGCCAAGAATCATGTCAACGTTATTATTTCATACTTGCTTATATCTGTAACCTATACCTTGCTCCAGCATTAAAAAGAATACCCCCATTACAATGCTTAGTCATTGATGGTGTATGGCTAAGTGGTGGAATCAGGTTTGTCATGTTTGAGCTTCAACCACAAAATGCAGAGGCGATAGTTGTTAATCCTTTTAATTTATCAAATTTGAAACTGCTAAAACGTAAAAAAATCCTTAATCTTCAGAAGATGCGCTGGAGGCATCATTTGAGAGAGCTTCAGGGATATTGGTGTAGCATTGTAGCAATGACTATTTCAGTTCTCATTGTTGCCTTAGTCAGCAGCTATTCAGCTCCAATAATTGCTGAAAAGAGATTTGACCCAGCTGAAAGAGTAAAACAACTGTTATCGTCATCTACAGCAAAGTCTAATGCTTATGTACTCCCTACACCTGTCAGCATTAATGAAATAAAAAATAGTTCTGCCCCTCGCACCAGCGCAAGTGGACATTCACATAATTTGTGGCATTCTTCCCCTTTGGATGAGAAAAAGAATGAGAAAGATTTTGTTGATGGTAGAGTGTCAGCACCAACTATCCCTAGATCTAACTCTGTTCTCAAAGAAAGCAACAGTGAACGTACTTCCACCCAGTTACCTCGCCCTTCGGCAGAGGGACTATCACTTCCACAAGTTGATATTTTCAATGCTTATGATACTGACAAGATAAAAAGACACGCTTTTTCAGGTCCATTGACTACAAAACCATTGTCAGTAAAACCTAGTTCATCTGGCGTTTCTATAGGATCAACTGACTTACCACCACTAGTCTCTGGGGTATTTCCGCGTTTGCGAATGTCTCAGCCTTTATCACCAAAAGTGTCTCCTGCTGCTTCACCTCCCCTTGATTCTTCTCCTAGGATAAGTGAGCTTCATGAGCTTCCTAGACCCCCTGGTAATCAATCTGCCAAGCCAGTGAATTCTTCTCGAACAGGTCACTCTGCTCCATTGGTATTCAGAAATCCCGAGCATCCTTCAAATAAATTTCCTTCAGTTGTATTGAGTGCAGCATCTCCGCTTCCAGCTCCACCTGTAATAGTCTCTCGGAGTTTTTCTATACCACCTAGTAGTCAGAGAGCTACGGCATTAAGTGTTACCAAGTATTTGGATACTCCCAGAGTTTTAGAGAAGGTCAAAGAAGCTGCATCACCTCCACTTGCACCTAAATCCCAGAGAGCATCAAGTAAACTTGACCTGGCTTCTCACTCTAGTGAAATCCAAGATACGTATCCTACCATCTTAGTTTTTTGTTCAAAACGTTTCAGATACTACAAGGATGTGATGGAATGGAAAGGGAAAGTTTCTCATTCCATTCCATTGGCCCCACCCCAAATTCGACGTGATGATGAGAACTAA 2337 0.4134 MKSSLNKLKRIALPKSVVKDKKKFQQSTKFDELALAAKDMQEMRDCYDSLLAAAAATENSAYEFAESLGEMGNCLLEKTTLNEDEESGECRSHIIQTITNPSESLLNEIRTVEALLYDIRFVGALYVRDLKVLIRKKENDNSGIWTLDMKRQCDEKRDVYEYMIGQHKEKGRSKSGKGESITSQQLQGAHDAYEEEATLCVFRLKSLKQGQSRSFLTQAARHYAAQLNFFRKGLKSLEAVEPHVRVVAEQQHIDYQFSSLEEDDVKDGYDDDDDDEKDYETNEGGELSFDYRSNKQGPDIVSTSPNSTECQESCQRYYFILAYICNLYLAPALKRIPPLQCLVIDGVWLSGGIRFVMFELQPQNAEAIVVNPFNLSNLKLLKRKKILNLQKMRWRHHLRELQGYWCSIVAMTISVLIVALVSSYSAPIIAEKRFDPAERVKQLLSSSTAKSNAYVLPTPVSINEIKNSSAPRTSASGHSHNLWHSSPLDEKKNEKDFVDGRVSAPTIPRSNSVLKESNSERTSTQLPRPSAEGLSLPQVDIFNAYDTDKIKRHAFSGPLTTKPLSVKPSSSGVSIGSTDLPPLVSGVFPRLRMSQPLSPKVSPAASPPLDSSPRISELHELPRPPGNQSAKPVNSSRTGHSAPLVFRNPEHPSNKFPSVVLSAASPLPAPPVIVSRSFSIPPSSQRATALSVTKYLDTPRVLEKVKEAASPPLAPKSQRASSKLDLASHSSEIQDTYPTILVFCSKRFRYYKDVMEWKGKVSHSIPLAPPQIRRDDEN 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0175 778 MobiDBLite consensus disorder prediction 263 307 - -
Lal10g0175 778 MobiDBLite consensus disorder prediction 557 579 - -
Lal10g0175 778 MobiDBLite consensus disorder prediction 484 499 - -
Lal10g0175 778 MobiDBLite consensus disorder prediction 628 642 - -
Lal10g0175 778 SUPERFAMILY BAR/IMD domain-like 37 251 IPR027267 -
Lal10g0175 778 MobiDBLite consensus disorder prediction 264 281 - -
Lal10g0175 778 MobiDBLite consensus disorder prediction 505 531 - -
Lal10g0175 778 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 148 312 IPR037488 -
Lal10g0175 778 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 421 723 IPR037488 -
Lal10g0175 778 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 114 IPR037488 -
Lal10g0175 778 MobiDBLite consensus disorder prediction 595 649 - -
Lal10g0175 778 CDD BAR 39 243 - -
Lal10g0175 778 MobiDBLite consensus disorder prediction 467 532 - -
Lal10g0175 778 MobiDBLite consensus disorder prediction 562 578 - -
Lal10g0175 778 Gene3D Arfaptin homology (AH) domain/BAR domain 31 267 IPR027267 -
Lal10g0175 778 MobiDBLite consensus disorder prediction 467 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0175 Lal-Chr10 2051613 2059638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0175 - - lja:Lj1g3v3892320.3 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0175 10 2051613 2059638 Lal10g0175 10 2051613 2059638 ECH