Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0128 ATGGTGAACTCATTGAGCCTTCATTCTAGGAGAAAAAATCCTTTATGGGTTGCAGCTTATTGCTTCAACCAGCTCAAGAAAGCTCAAGTTTTTGACACTGATATTTCCTCCATTGTTGATCAGATTTTGCGCGATGAAATTGATGTTGTCTCCTATAGAGTGCTGTCCTATCTTCTGCTCGGCGTTGTCAGGATATACTCAAGAAAGGTTGACTATCTGTCCTATGATTGCGATGATGTGCTCATTAAAATCAATAAGTTTGTGATCAACAGAAAAGAACTTGCGCGTGTGGAAAACTTGCGAATGTCTGTCACGATACCAGACAGATTTGAATTAGACGCGATCGATTTAGATGCACTTGAAGAATCGGGCGGAAGCAACATTGCTTCCAAAGAGGACATCACTTTGCAAGATGTTTCATGCACAAGTGAGAGATTTGGACTCCTTTCTTTAGACAAGTTTGATGAGTTTGATATCGGCGAAAGTAGCAACTCTGTAAATCATCTTATGCTGGAAGACGTTCGTCGATCCGTCTTGATGGAGATGGACTTTGAGTTTTGTAAGATGCCTTTCAACATTGATCAATCCGACTTGATGGAGCTGGACTTCGAAGTTCTCCGGTCGAATAGTCCAATTAATTCACTGCCCGGCAAGGTCATAGACTTAGACACTGTCATAGCAGACGAGGGAGCTGAAGAAGAATCTTCCGACTTGCTTAGTAAAGTTCAACACATCAATGATGATGAGAGAGTTCAACTTACTGCGCCTGAAAAATGTAGAATACCTCAAGAGAGATCTGCGGATATCAGTATGATTTTTGGAACACAGAATGAACGCGTAGACCGTTCTGATTATTCAGCTTCTATGGAGAATATTGAAGATCTCATCACTGAAGGGCCTGTTAAAAAATTAAAGTCTCAAGAAAAGTTTCCTAACCAAGATGTTAAGCTAAGTGTGATTCCACCACAATCAGAAAATCTTGATGCAACTCCGCAATCGATGTTTCAAGGCGATTCGACTGGAAGACCGACATTAGGTGGTATGTCGCCGAATTTTATGCTGATTTCGACACCGGCTTTGAGCGAACATGGTGGCTTGTCCAGGAAAAGAAAAACTATTGACAAAATGATTATCATTTCAAACAATGTGCTGAAAAAGAATATACAAGACGCTAGCGATTTAGTTTCTGGCCGTGGAAAATCTCGCTCTACTTTACTCACAATGGAGAAGAAGTCTCGCATTTCCAGGATTTCTGATGGATTACACGAATCCTTGGTTCCCTGCCAATCCTCAAAGATCGGATTTCTATTCCCTAAAAACAAATTGAGAATAGGAAATAAACTTCAAATTGTGGAAACTCCAGTGAATTCACATGTGGCAGAATCTCGAACTGTTCGCCTTCGCAGGCACGTAGGAGCTTGTCCACAAACCCCACCCCAGTGCACAGCAATAAAAGGTAGATCAAATGAGAATCCAGCGACAACAGAAATCGAAAACTCGGATAATTTAGGACCTTTAACTCCACATGTAAGCGTAGAGGTAGACCAATCTTCAAAAAGTGATGAGGGCCTTAATCCGACAGAAGAGTTTAACTTAGGAAACTCAATTTCATGTGAAAGTTTAGAGAAGGAGCAAAATTTGACTGAGGATGATGATGATGATCCTAATCTGATGAATGAGGATATAAGCTCATCTGAAACAGAGAATTCAGAATTGAGTGAGAACTCTTTAACTGGTTGGTCGGCGCAAACCGGGAACATTGCAAAGTCCTTGCAGAGGACATTTCAGGATAAAAGGAACAAACAAGAGGAAGAAGTTGTGAAATTTTCACAAGTTGTTAAAGGCCAACCCAGGAAACAATGTGCTAAGCTATTTTATGAAATGCTGGTTTTAAAAACTACAAACTGTGTGGATGTGAAACAAGACTCTCCATATGCTGATATTGCAATAAAAAACAAACCTAAGTTAGATGAAACTCTTGCAACTTATGAAGACATGTAA 2001 0.4023 MVNSLSLHSRRKNPLWVAAYCFNQLKKAQVFDTDISSIVDQILRDEIDVVSYRVLSYLLLGVVRIYSRKVDYLSYDCDDVLIKINKFVINRKELARVENLRMSVTIPDRFELDAIDLDALEESGGSNIASKEDITLQDVSCTSERFGLLSLDKFDEFDIGESSNSVNHLMLEDVRRSVLMEMDFEFCKMPFNIDQSDLMELDFEVLRSNSPINSLPGKVIDLDTVIADEGAEEESSDLLSKVQHINDDERVQLTAPEKCRIPQERSADISMIFGTQNERVDRSDYSASMENIEDLITEGPVKKLKSQEKFPNQDVKLSVIPPQSENLDATPQSMFQGDSTGRPTLGGMSPNFMLISTPALSEHGGLSRKRKTIDKMIIISNNVLKKNIQDASDLVSGRGKSRSTLLTMEKKSRISRISDGLHESLVPCQSSKIGFLFPKNKLRIGNKLQIVETPVNSHVAESRTVRLRRHVGACPQTPPQCTAIKGRSNENPATTEIENSDNLGPLTPHVSVEVDQSSKSDEGLNPTEEFNLGNSISCESLEKEQNLTEDDDDDPNLMNEDISSSETENSELSENSLTGWSAQTGNIAKSLQRTFQDKRNKQEEEVVKFSQVVKGQPRKQCAKLFYEMLVLKTTNCVDVKQDSPYADIAIKNKPKLDETLATYEDM 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0128 666 Pfam Conserved region of Rad21 / Rec8 like protein 603 656 IPR006909 -
Lal10g0128 666 MobiDBLite consensus disorder prediction 545 559 - -
Lal10g0128 666 MobiDBLite consensus disorder prediction 481 542 - -
Lal10g0128 666 Pfam N terminus of Rad21 / Rec8 like protein 15 91 IPR006910 GO:0005515
Lal10g0128 666 Gene3D Structural maintenance of chromosome 1. Chain E 582 660 IPR023093 -
Lal10g0128 666 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 661 - -
Lal10g0128 666 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 661 IPR039781 GO:0007062|GO:0008278
Lal10g0128 666 MobiDBLite consensus disorder prediction 560 576 - -
Lal10g0128 666 MobiDBLite consensus disorder prediction 478 576 - -
Lal10g0128 666 SUPERFAMILY "Winged helix" DNA-binding domain 585 656 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0128 Lal-Chr10 1440799 1447473 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0128 K06670 - csin:114302273 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0128 10 1440799 1447473 Lal10g0128 10 1440799 1447473 ECH