Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0074 ATGCTTCCCCGATTCTCTAATCTCCTCCGCTCCAATTCTTTCGATTCCGCCAACACCACCATGGCGCGTGCGGCTTTTACTTTCACACGCGCCACCCTTATTCCTTCATTTTCTTCTTCCTCCTCCTCCTCCTCTTCCGATTTCGCTTCCGTTCATCTCTCAAACCTTCATTTTCATTCAAAATCATCATCATGGCTTGGATTTCACGATGCTCTGTGCTGTAACGAGAGGAAGCGTTTAGGGACACCTTTGGTGAGAGCGCGTGCGGAACAGAAGAGAGAGTATCGGAAAGTGAGAAGAACGCGAGCTTCCAAAATCACTCCAAAGGAGTTGCAACTCTCTGTTGGTATTTGTATTGAAGAAGATTTGCCTGATGATCCTGAAATTTTGAACATTGCAGAGATGCTTCGCCTAAATGTTCCCATGGCAATGAAACTGGCATTTGATGGTTTGAAAGATTCGGAGTATAAAACAAGAGATGCTGCTATAAGTGATGTTGGTGGATTTGAAAGTATTGAGTTATCAGTGCTTCTATGCAATGATGACTTTATTCGAAAACTTAATAAGGAATGGAGAGACGAGGATCATGCCACTGATGTTCTCTCAATGTCATCACATATACCAGCGGTTAAGCTTCCTATTCTTATGATGGGGGATATTGTAATTTCTGTCGAGACAGCAGCAAGGCAAGCAGAGGAAAGAGGGCTCAGTCTTATTGATGAGATCCGTATCCTCATGGTTCATGGCTTGTTACATCTTTTGGGATTTGATCATGAAATAAGTGAAGAGGCTGAAGTGGAAATGGAGAGAGAGGAGGAACTCCTTTTAAAGAGTCTTGGTTGGAAGGGAAAAGGGCTAATAAAGAGTGCATATGATACTGAAATAAATTCAAATTCTCACCATGATGGTTCTGATGATGAATTGTCAAAAGACAGGAAAAAAGAAGGCAGTCTTAGATTTTACAAACCAAAGTTCAGCCATATCTTCTGTGATATGGATGGAACATTGCTGAACAGCAAAAGTCAAATTAGTCCTGCGACTGCCAATGCATTGAGAGAAGCCACATCAAGGGGTGTAAAAATTGTGATAGCTACCGGAAAGGCTCGTCCAGCTGTGATAGATATTTTTAAGATGGTGGATTTAGCTGGAAAAGATGGCATTGTTTCAGAGTTTTCTCCTGGGGTTTTCTTACAGGGATTGCTTGTTTATGGTAGACAAGGTGAAGAAATATTTAGGAGCAACTTAGATTCAAACGTCTCTAGAGAGGCATGTCTTTACTCTTTGGAACATAAGGTTCCACTTGTTGCATTTGCTGAAGGCCGCTGCTTAACCCTTTTTCATGACCCACTTGTCGATTCACTGCATACGGTATACCACGAACCAAAGGCTGAGATCATGCCTTCCGTAGAACATCTTCTAGCTTCTGCTGAGATACAGAAAATGATTTTCTTAGATACTGAGCAGAGGGTGGCTAGTACTTTACGGCCATACTGGTCAAATGCAACAAAAGGTTGTGCCAATGTTGTTCAAGCTGTGCCAGACATGCTGGAAATTGTACCCTTGGGAACATGCAAGGGGAATGGAGTAAAAGTGCTGCTAGATCATTTGGGGGTTACTGCAAAGGAGATAATGGCTATTGGTGATGGGGAAAATGATGTTGAGATGCTTGAGCTGGCTTCTCTAGGCATTGCACTTAGTAATGGATCAGAGAAGACCAAAGCTGTGGCTAATGTAATTGGTTCCAGCAATGATGAAGATGGTGTAGCAGATGCCATCTACCGATACGCGTTTTGA 1794 0.4259 MLPRFSNLLRSNSFDSANTTMARAAFTFTRATLIPSFSSSSSSSSSDFASVHLSNLHFHSKSSSWLGFHDALCCNERKRLGTPLVRARAEQKREYRKVRRTRASKITPKELQLSVGICIEEDLPDDPEILNIAEMLRLNVPMAMKLAFDGLKDSEYKTRDAAISDVGGFESIELSVLLCNDDFIRKLNKEWRDEDHATDVLSMSSHIPAVKLPILMMGDIVISVETAARQAEERGLSLIDEIRILMVHGLLHLLGFDHEISEEAEVEMEREEELLLKSLGWKGKGLIKSAYDTEINSNSHHDGSDDELSKDRKKEGSLRFYKPKFSHIFCDMDGTLLNSKSQISPATANALREATSRGVKIVIATGKARPAVIDIFKMVDLAGKDGIVSEFSPGVFLQGLLVYGRQGEEIFRSNLDSNVSREACLYSLEHKVPLVAFAEGRCLTLFHDPLVDSLHTVYHEPKAEIMPSVEHLLASAEIQKMIFLDTEQRVASTLRPYWSNATKGCANVVQAVPDMLEIVPLGTCKGNGVKVLLDHLGVTAKEIMAIGDGENDVEMLELASLGIALSNGSEKTKAVANVIGSSNDEDGVADAIYRYAF 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0074 597 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 28 597 IPR002036 GO:0004222|GO:0006364
Lal10g0074 597 ProSitePatterns Uncharacterized protein family UPF0054 signature. 248 258 IPR020549 -
Lal10g0074 597 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 28 597 - -
Lal10g0074 597 Gene3D Metalloproteases ("zincins"), catalytic domain 148 285 IPR023091 GO:0004222
Lal10g0074 597 SUPERFAMILY HAD-like 321 595 IPR036412 -
Lal10g0074 597 Gene3D - 414 521 - -
Lal10g0074 597 Hamap Endoribonuclease YbeY [ybeY]. 112 283 IPR002036 GO:0004222|GO:0006364
Lal10g0074 597 Pfam Endoribonuclease YbeY 168 278 IPR002036 GO:0004222|GO:0006364
Lal10g0074 597 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 164 285 - -
Lal10g0074 597 Pfam haloacid dehalogenase-like hydrolase 328 592 - -
Lal10g0074 597 SFLD C2.B: Phosphomannomutase and Phosphatase Like 328 596 - -
Lal10g0074 597 ProSitePatterns Hypothetical cof family signature 2. 546 568 - -
Lal10g0074 597 TIGRFAM Cof-subfamily: Cof-like hydrolase 328 592 IPR000150 GO:0016787
Lal10g0074 597 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 327 564 IPR006379 -
Lal10g0074 597 TIGRFAM TIGR00043: rRNA maturation RNase YbeY 173 279 IPR002036 GO:0004222|GO:0006364
Lal10g0074 597 SFLD Haloacid Dehalogenase 328 596 - -
Lal10g0074 597 Gene3D - 328 592 IPR023214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0074 - - lang:109344407 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0074 10 849687 859406 Lal10g0074 10 849687 859406 ECH