Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0069 ATGGAACACTCTTCTAAAGAAGATATGAAGCTTATGGAAAATGAAAATGGCTTCACTTTCTCATCATCTACACAAAGTAAGGGTGGCTTAAGGACCATGCCCTTCATCATAGTGAATGAGTGTTTGGAGAAGGTTGCAAGCTGTGGGATTATGCCTAACATGATATTGTACTTGAAGAATGAGTATAATATGGCTATGGTCAATGCCACTAACCTTCTATATACTTGGTCTGCCATGTCCAACATCTTGTCCATCTTTGGAGCCTTTCTCTCTGATGCTTACTTGGGTAGATTCCTTGTCATTTTGATTGGTTCCATTTCTAGCCTTCTTGGTTTAACGGTTTTGTGGTTAACTGCCATGACCCCTGAGCTAAGACCTTCCTGTGAAACAATCAATGGACTTCGTAACTCTGCTTCGGCTGCCCAACTCGCAGTTTTGTTCATTTCCTTGGGACTAATTTCCATCGGAGCGGGGTGTGTTAGACCTTGTTCCATAGCCTTTGGAGCAGACCAACTGTCAACTAAAGAAAACTCCAGTGATGAGAGGCTTTTGGATAGCTACTTCAATTGGTATTATAGCTCAATAGGAGCTTCAACTCTTGTTGCATTCGGTGTAATTGTGTACATTCAAGAAAACCTTGGTTGGAAAATCGGGTTTGCAGTACCTGCAATTCTCATGCTCATATCGGCCTTCAGTTTCATTATCGGTTCACCATACTATGTCAAAGTGAAAGCAAGTAATAGCTTATTTACTAGTTTCGTACAAGTAGTTGTCGTGGCTACGAAAAACAGAAAAATTAATCTTTCAGAATGCATCCCTGATCAGTATTATCATGGCCGCGATCCGAATGTGCTAGTCCCTACAGATAGCCTAAGGTTTTTGAACAAAGCTTGCGTAACAAGAAATCGTGTGAGAGACTTAAAGCCGGATGGATCAATTTCAGATCCATGGAGCCTATGCACAGTAGAAAAGTGTCCTTCCGATGTGGTCCACGAGCATCTTCATGGTGTCCCAAGGCTCATTCTCAATGCTTCAAGCAAATACCATGGACTGGCGGGGCGGGTATTCGGTAATTTCAAGATTCCAGCAGGATCATTCAATATTATCATGATTATCACCTTATCAATTGTCATTCCAGTATATGACCGTGTAATAGTACCTTGGGTCACAAGATACACAAGCCACCCTAGAGGATTCAGTTCCAAATTTCGAATGGGGATCAGGTTGTTATTTATAATTGCATCTAGAGCAACATCAACTATAGTCGAAACTGCGAGACGAAGCGCAGCCATCGAAGAAGGGTTCGAGGACCAACCCAATGCTGAAATTAACATGACAGCATTATGGCTGGTTCCACAATTTGTTATACTTGGATTTGCCGAGGCTTTCTATCCGATAGGGCAGGTCGAGTTTTTCTACTCTTACTTCCCAAAGAGCATGTCTAGTTTCGCAATGGCGATTGTCACCCTCGGACTCGCTGCTGCCGATGTAGTAGGGAGTGTGGTGCTGAACACTGTGGATAAGGTTACTAGTATAGGAGGGAATGAGAGTTGGTTATCAACTAACATTAATAAGGGTCATCTGAATTACTATTATGCACTAACAACTTTGATAGGTTCGATTAACTTCCTCTACTTTCTTGCCATTTGTTGGGCTTATGGACCTAATCGAGTCGAAAAAGTCGATGCTTCCACAGGCAAGGAAGATGAGCAATTTCATTACATGGAGTTACCTTCTTCATAG 1743 0.4211 MEHSSKEDMKLMENENGFTFSSSTQSKGGLRTMPFIIVNECLEKVASCGIMPNMILYLKNEYNMAMVNATNLLYTWSAMSNILSIFGAFLSDAYLGRFLVILIGSISSLLGLTVLWLTAMTPELRPSCETINGLRNSASAAQLAVLFISLGLISIGAGCVRPCSIAFGADQLSTKENSSDERLLDSYFNWYYSSIGASTLVAFGVIVYIQENLGWKIGFAVPAILMLISAFSFIIGSPYYVKVKASNSLFTSFVQVVVVATKNRKINLSECIPDQYYHGRDPNVLVPTDSLRFLNKACVTRNRVRDLKPDGSISDPWSLCTVEKCPSDVVHEHLHGVPRLILNASSKYHGLAGRVFGNFKIPAGSFNIIMIITLSIVIPVYDRVIVPWVTRYTSHPRGFSSKFRMGIRLLFIIASRATSTIVETARRSAAIEEGFEDQPNAEINMTALWLVPQFVILGFAEAFYPIGQVEFFYSYFPKSMSSFAMAIVTLGLAAADVVGSVVLNTVDKVTSIGGNESWLSTNINKGHLNYYYALTTLIGSINFLYFLAICWAYGPNRVEKVDASTGKEDEQFHYMELPSS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0069 580 Pfam POT family 98 290 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal10g0069 580 Pfam POT family 353 519 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal10g0069 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 355 560 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal10g0069 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 324 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal10g0069 580 Gene3D MFS general substrate transporter like domains 5 562 IPR036259 -
Lal10g0069 580 PANTHER OS01G0761500 PROTEIN 24 324 - -
Lal10g0069 580 PANTHER OS01G0761500 PROTEIN 355 560 - -
Lal10g0069 580 SUPERFAMILY MFS general substrate transporter 49 244 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0069 Lal-Chr10 804300 807962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0069 25 572 Organic Solute Cotransporters AT1G52190 46.303 1.97e-178 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0069 K14638 - gmx:100783985 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0069 10 804300 807962 Lal10g0069 10 804300 807962 ECH