Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0043 ATGGTGGCTGCAATGGTTTCTCTACCTAAACTCATTCACACTCTTTCATCTTATTCTTCTTCTTTAAGAACAAAAAGCATTACTAGAGCCATTAGCAACAACATAATAACTCTGTCAAAGAAGGAAAAGCAAAAGTTAGGGTTAGTGAAGGAGAAGAGAAGGACTCGATCTGATAAAGAATTCGATAAGGATTCAATAATTGAACGCTATGGATCTTCCTCTCATATACCTGTTATGCTCAATGAAGTTCTTCACGTTTTCTCCAATTCTTTATCTTTGAACTCTTTCGTTGATTGCACCCTTGGTGCTGCTGGTCATTCCTCTGCTGTGATTAGTGATCATCCAGAATTGAAGTATTTTATTGGGATGGATGTGGATCCGGTGGCACATAAGATGGCTCGAGCTCGAATCAGTTCTGTTTTGCATAGTGATGACTCTAGTGTCAAAGTATTTACAATGTTAAAGAATTTTAGACATATAAAGTCTGCGCTTGTAGAAACTGGTGTGGAACAGTTAATAGCTAACGGCGTTGATGGCATCTTAATGGACTTGGGAATGTCATCTATGCAGGTGGACAATCCTCAGAGAGGGTTCAGTGTGCTTGGTGATGGACCGCTTGATATGCGTATGGATCCTCAGGCAAGTCTTAAAGCAGAAGACATATTAAATTCTTGGCCAGATTCTGAATTGGGTCGTATCCTTAGGGATTATGGGGAAGAAAGTAATTGGCGTACTCTGCAAAAGAAGATTGCCCAAGCTCGATTAACCGGTGGATTCCATTCAACTGGTGACTTGCTTGATCTTATTCGTCGTGTTACTCCTGCAGCGAGAGGTGGACGGCAAGGTTGGATAAAGACGGCAACAAGAGTTTTTCAAGCTCTGAGAATTGCTGTTAATGATGAACTCAAGACTCTTGAGGATTCCCTCTATTCTTGTTTTGAATCCCTTGCACCTGGTGGTAGACTTGCTGTTATATCTTTCCACAGTCTTGAGGACAGAATTGTGAAGCAGACATTTCTTAATATAATCAAAGGCAGTGAAGACAATTTGACTCAAAGTGAGGGCTGCAATAGTGATTTGATTAAGGCTATTGATGAAATTAAAGAAAAAGAATCTTGGATTAGAAATGTAATACATGGTTCAAATGGAGCAATTCTTACAAAAAGACCAATCACACCATCAGGAGATGAAGAAAAGTTGAACCGCCGAAGCAGAAGTGCAAAGCTCAGGGTGATTCAGAAGATTTGA 1248 0.4006 MVAAMVSLPKLIHTLSSYSSSLRTKSITRAISNNIITLSKKEKQKLGLVKEKRRTRSDKEFDKDSIIERYGSSSHIPVMLNEVLHVFSNSLSLNSFVDCTLGAAGHSSAVISDHPELKYFIGMDVDPVAHKMARARISSVLHSDDSSVKVFTMLKNFRHIKSALVETGVEQLIANGVDGILMDLGMSSMQVDNPQRGFSVLGDGPLDMRMDPQASLKAEDILNSWPDSELGRILRDYGEESNWRTLQKKIAQARLTGGFHSTGDLLDLIRRVTPAARGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFESLAPGGRLAVISFHSLEDRIVKQTFLNIIKGSEDNLTQSEGCNSDLIKAIDEIKEKESWIRNVIHGSNGAILTKRPITPSGDEEKLNRRSRSAKLRVIQKI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0043 415 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 73 414 IPR002903 GO:0008168
Lal10g0043 415 Gene3D Putative methyltransferase TM0872, insert domain 194 301 IPR023397 GO:0008168
Lal10g0043 415 Gene3D Vaccinia Virus protein VP39 75 412 IPR029063 -
Lal10g0043 415 SUPERFAMILY Putative methyltransferase TM0872, insert domain 196 299 IPR023397 GO:0008168
Lal10g0043 415 Pfam MraW methylase family 73 415 IPR002903 GO:0008168
Lal10g0043 415 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 415 IPR029063 -
Lal10g0043 415 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 75 415 IPR002903 GO:0008168
Lal10g0043 415 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 52 415 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0043 K03438 - gmx:100803819 541.576