Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0012 ATGCCAAAGATAGATCATCAAGTACGTGCCAAAGACCCAAAGACACAGAGAGAGAGAGAGAGAGAGAAAATGAATGATGAGTACTGTGAGAAGATCCCATGTGTGAAATTTTGCAGTGAATGGGTATTGGGATTAGAGGAAGAAGAGAGTGAGGAATGGAGAAACATGAGCAAGAAAGTGAGAGAAGCATGTGAGAGATATGGTTGCTTTATATTAACATATGATGATGATAAGCACTTCCCTAAGGTTTTACGTGAAGACATGTTTATGGGTATAAAAGCTTTGTTTGATTTACCTAAAGAAACAAAGCTCAAACACAAAAGCACAAAGGCTTATAGAAGCTACAATAGTGACTGTCCCATAATTCCACTTTGTCAAAGCTTTGGGATTGATGATGCCCCTCTTTTCGATACTGCTCACGCCTTCACTAACCTCATGTGGCCTCAAGGAAATCCACCTTTCTGTGAGACAATGAAGAGCACAAGCTCAAAGATGCTTGAACTTAGTTTCGTAATATTGAAGATGATTGTAGAGAGTTATGGTCTTCCAAAGCAGTACATTTCCCATATTGAAGAGTTGAAGAGTAGTAGTAACTTGAGGATGATGAAGTACAAAGTTCCTGATGATATAAACAAAGGATGTGAATCTGCTTTGTTGCCTCACACTGATAAATGTACCTTAACCATTCTATGCCAAAATGAAGTTCAAGGTCTTCAAGTCCTAACCAAAACTGGCAAATGGATTCAATTGGATATACCCTTTGAAGGCTTTGTGGTCCTTGTTGGTGACACATTGCAGGCATGGAGTAATGGAAGAGTTGATGCAGCCACACACAGAGTGATGATGAGTGGAGAGAAAGAGAGATACTCATTTGGGGTATTTGCAATGCCAAAAGAAGAGGTGAAGATTGAGGTACCCTCTGAGTTTGTTGATGAAAATACATATCCTCTACGTTACAGGCCATTCATTTTTGGGGATTACTTCAACTACTTTGTCTCAGCTCCCAACCTAAATGCTTTAGACATGTTTGCAGCTGTTTAA 1041 0.3948 MPKIDHQVRAKDPKTQREREREKMNDEYCEKIPCVKFCSEWVLGLEEEESEEWRNMSKKVREACERYGCFILTYDDDKHFPKVLREDMFMGIKALFDLPKETKLKHKSTKAYRSYNSDCPIIPLCQSFGIDDAPLFDTAHAFTNLMWPQGNPPFCETMKSTSSKMLELSFVILKMIVESYGLPKQYISHIEELKSSSNLRMMKYKVPDDINKGCESALLPHTDKCTLTILCQNEVQGLQVLTKTGKWIQLDIPFEGFVVLVGDTLQAWSNGRVDAATHRVMMSGEKERYSFGVFAMPKEEVKIEVPSEFVDENTYPLRYRPFIFGDYFNYFVSAPNLNALDMFAAV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0012 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 297 IPR005123 -
Lal10g0012 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 29 345 - -
Lal10g0012 346 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 29 345 - -
Lal10g0012 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 116 IPR026992 -
Lal10g0012 346 SUPERFAMILY Clavaminate synthase-like 46 333 - -
Lal10g0012 346 MobiDBLite consensus disorder prediction 1 22 - -
Lal10g0012 346 Pfam 2OG-Fe(II) oxygenase superfamily 203 295 IPR044861 -
Lal10g0012 346 Gene3D - 31 342 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0012 Lal-Chr10 123998 129867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0012 148 327 Glycosyltransferase AT5G59530 28.108 8.09e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0012 - - aip:107648447 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0012 10 123998 129867 Lal10g0012 10 123998 129867 ECH