Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1998 ATGAATCCCGAGTATGATTATCTGTTCAAGCTCCTTCTTATTGGAGACTCTGGTGTTGGTAAATCATGCCTTCTTCTGAGATTTGCTGATGATTCGTACATCGAAAGCTACATAAGCACCATTGGAGTTGATTTTTGGGACACAGCTGGGCAAGAACGATTTAGGACAATCACCAGTAGCTACTACCGTGGTGCCCATGGGATCATTATTGTTTATGATGTGACAGATGAAGAGAGCTTCAATAATGTGAAGCAGTGGCTCAGTGAAATTGATCGCTATGCAAGTGATAATGTTAACAAGCTTTTGGTTGGCAACAAGTGTGATCTGGAAGCAAATAGAGCAGTGTCATATGAAACAGCTAAGGCATTTGCAGATGGAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGATGCTACAAATGTCGAACAGGCTTTCATGGCAATGACTGCTTCAATCAAGGATAGAATGGCAAGCCAACCTGCAAATAATGCAAGGCCTCCAACAGTGCAGATCAGGGGTCAGCCAGTTGCACAGAAAGGTGGGTGCTGCTCTTCCTGA 561 0.4314 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRMASQPANNARPPTVQIRGQPVAQKGGCCSS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1998 186 PANTHER RAS-RELATED PROTEIN RABD2A-LIKE 46 185 - -
Gso9g1998 186 PANTHER RAS-RELATED PROTEIN RABD2A-LIKE 6 45 - -
Gso9g1998 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 162 IPR027417 -
Gso9g1998 186 TIGRFAM small_GTP: small GTP-binding protein domain 7 148 IPR005225 GO:0005525
Gso9g1998 186 PANTHER LD21953P-RELATED 6 45 - -
Gso9g1998 186 PANTHER LD21953P-RELATED 46 185 - -
Gso9g1998 186 SMART ras_sub_4 6 156 - -
Gso9g1998 186 CDD Rab1_Ypt1 7 156 - -
Gso9g1998 186 ProSiteProfiles small GTPase Ras family profile. 1 186 IPR001806 GO:0003924|GO:0005525
Gso9g1998 186 MobiDBLite consensus disorder prediction 158 186 - -
Gso9g1998 186 PRINTS Transforming protein P21 ras signature 9 30 - -
Gso9g1998 186 PRINTS Transforming protein P21 ras signature 96 109 - -
Gso9g1998 186 PRINTS Transforming protein P21 ras signature 131 153 - -
Gso9g1998 186 SMART rho_sub_3 11 155 IPR001806 GO:0003924|GO:0005525
Gso9g1998 186 Pfam Ras family 10 154 IPR001806 GO:0003924|GO:0005525
Gso9g1998 186 Gene3D - 2 180 IPR027417 -
Gso9g1998 186 ProSiteProfiles small GTPase Rab1 family profile. 4 186 - -
Gso9g1998 186 SMART rab_sub_5 9 156 - -
Gso9g1998 186 SMART ran_sub_2 14 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1998 Gso-Chr9 44458663 44462356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1998 K07874 - gmx:547803 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1811 18 50633537 50637219 Gso9g1998 9 44458663 44462356 GST
Gso3g0944 3 33302746 33306548 Gso9g1998 9 44458663 44462356 PCT