Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1913 ATGGTGGATAAACCAATGAGCATTCATCGAACCCGGTTCCCATTCTCGATCACCAAGCTCCTCTTCTGGTCGCTTATCCTACTCAGCTTCATTGTGCTCTTCTTCTTGGGATCTCCCCCGTCCTCCGCTTCCCCTTCCCACCGCCGGCGCTCCCTCCGCGGCGGCGACTGGGAGACCTCCGTTCGCGAATCCGCCAAGTCCAAATCCCTCCGCGTCCTGGTGACCGGCGCAGCCGGTTTCGTGGGGACACACGTGTCCATCGCTCTGAAGCGGCGGGGAGACGGCGTGGTCGGAATCGACAACTTCAACCGCTACTACGAGGCTTCCCTGAAGCGCGCCCGCAGCAACCTCCTCGCACAGCACAAAATCTTCGTGGTGGAAGGCGACATCAACGACGGCTCCCTCTTAAAGTCTCTCTTCAAGCTGGGGAAGTTCACTCACGTGATGCACCTGGCGGCCCAGGCCGGTGTGCGCTACGCCATGAAGAACCCTAAGTCCTACGTCCACAGCAACATCGCGGGCCTCGTCAGCGTCCTGGAGGCCTGCAAGAACGCGAACCCGCAGCCGGCGGTTGTGTGGGCCTCATCCAGCTCCGTCTACGGCCTCAATTCCAAAGTCCCCTTCTCAGAGAAAGATCGCACGGACAGGCCCGCCAGCCTCTACGCCGCGAGCAAAAAAGCCGGCGAGGAAATCGCTCACACTTACAACCACATCTACGGGCTTTCCATTACAGGGCTGAGGTTCTTCACAGTCTATGGGCCCTGGGGTCGGCCCGATATGGCTTACTTTTTCTTCACAAAGGATATATTGAAAGGGAAGCAGATATCTGTTTTCGAGGGTCCCAATGGACGATCAGTTGCGAGGGACTTTACTTACATTGATGATATTGTGAAGGGATGTTTGGGGGCGTTGGATACTGCCAACAGGAGCACTGGGAGTGGGCCGGCCCAGTTGCGGCTCTACAATCTGGGCAACACTTCTCCCGTGGCGGTGAGTAAGCTGGTGAGGATATTGGAGAAGTTGCTCAAGGTTAACGCCAACAAGAAACTCTTGCCAATGCCGCCCAATGGGGATGTTTTTTTCACCCATGCTGATATTAGCTTGGCTAAGAAGGAGCTTGGCTACAACCCCACCATCGATTTGGAAACCGGCTTGAGGAAATTTCTCGATTGGTATATGGACTATTATTCTTCCTCTTCCTCTCTGCCCAAGAGGGCTTGGCTTCCAACACTGAACACATGGCCAAAAGGAAGAGAGATGAGACAGATTTCCATTGATTGA 1281 0.5527 MVDKPMSIHRTRFPFSITKLLFWSLILLSFIVLFFLGSPPSSASPSHRRRSLRGGDWETSVRESAKSKSLRVLVTGAAGFVGTHVSIALKRRGDGVVGIDNFNRYYEASLKRARSNLLAQHKIFVVEGDINDGSLLKSLFKLGKFTHVMHLAAQAGVRYAMKNPKSYVHSNIAGLVSVLEACKNANPQPAVVWASSSSVYGLNSKVPFSEKDRTDRPASLYAASKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKQISVFEGPNGRSVARDFTYIDDIVKGCLGALDTANRSTGSGPAQLRLYNLGNTSPVAVSKLVRILEKLLKVNANKKLLPMPPNGDVFFTHADISLAKKELGYNPTIDLETGLRKFLDWYMDYYSSSSSLPKRAWLPTLNTWPKGREMRQISID* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1913 426 PRINTS Nucleotide sugar epimerase signature 98 114 - -
Gso9g1913 426 PRINTS Nucleotide sugar epimerase signature 288 303 - -
Gso9g1913 426 PRINTS Nucleotide sugar epimerase signature 318 333 - -
Gso9g1913 426 PRINTS Nucleotide sugar epimerase signature 358 375 - -
Gso9g1913 426 PANTHER UDP-GLUCURONATE 4-EPIMERASE 4 9 400 - -
Gso9g1913 426 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 67 398 IPR036291 -
Gso9g1913 426 Pfam GDP-mannose 4,6 dehydratase 73 387 IPR016040 -
Gso9g1913 426 Gene3D - 70 398 - -
Gso9g1913 426 PANTHER EPIMERASE-RELATED 9 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1913 Gso-Chr9 43495803 43500235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1913 8 397 Miscellaneous Gene Families AT4G00110 70.720 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1913 K08679 - gmx:100819586 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1913 9 43495803 43500235 Gso9g1913 9 43495803 43500235 ECH