Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1901 ATGACTTGGAGGAAGGATTCTGCGCTTCAAGATGTCTATATAATTCCTGATACTACTGTTGACTTGGTTGGTGGTTACTACGATGCTGGTGACAACGTGAAATTCAACTTTCCAATGGCATTTTCAACAACCATGCTGGCCTGGAGTGTAATAGAGTTCGGAAAATTGATGGGTCCAGACCTTAAACATGCGTTAGACGCTATTCGTTGGGCCACAGAGTATTTCCTCAAAGCCACAAGCATCCCCGGTTTTGTGTTTGCACAAGTTGGTGACCCTTATGCTGATCACAATTGCTGGGAGAGACCAGAAGACATGGACACCCCAAGAACAGCCTTTGCTGTTAGCAGGGACTTCCCTGGCTCTGAAGTTTCAGCAGAGATAGCAGCAGCACTTGCAGCCTCTTCAGTTGTATATAGAAAGTATCATATAGGCTACTCTACAAGACTTCTCCAAAGGGCTATAAAGGTTTTTGACTTTGCAGATAAGTACAGAGGATCATACAATGACAGCCTCGGACCGTGGGTATGCCCATTCTATTGTGATTTTAGTGGCTACCAGGACGAATTGGTGTGGGGAGCAGCATGGTTGTTCAAGGCTACTAAACGCCCTTACTACTTAGATTACATTGACAAAAACATTTATAATCTGAAAAACTTTGCTGAATTTGGATGGGACTCAAAGGACGCTGGCATCAACGTGCTCGTCTCTAAGCTTCTAATTAATAGTAGCTCTAATTCTAAGCCTTTCATCCTCAATAATGCGGACAAGTTTGTCTGTTCTGTGCTACCTGAATCGCCTTCAGTATCGGTCTCATACTCTCCAGGTGGGCTTCTATTCAAGCCTGGGGGGAGTAACTTGCAGCATGCAACAGCAATCTCATTTCTGTTTCTGGTTTATGCTGGCTATTTGAAAAAGACGAATAAAGAGATTGACTGTGGCGGTAAAGTTTTTGCTTCTCCAAAGCGACTTAAACAAATAGCAAGAGGCCAGGTGGATTACATACTAGGAAGCAATCCAGTGAATATGTCATACATGGTAGGATACGGTGCAAAATATCCTGAAAGAATACATCATCGTGCGTCGTCATTGCCATCCGTAGATGAGCACCGTGGGCACATTGGTTGCAAAGGAGGATCATTTTATTTTCACAGCCAAAATCCAAACCCCAACTTGCTTGTAGGAGCTGTTGTGGGGGGACCTGATATGAAGGATTCATACGCAGATTCTCGAGCAGATTTTGTACACTCTGAACCTACAACATACATCAATGCACCCCTTATAGGTGTTTTGGCATACTTCAATTCACATCCATCCTAA 1317 0.4366 MTWRKDSALQDVYIIPDTTVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVIEFGKLMGPDLKHALDAIRWATEYFLKATSIPGFVFAQVGDPYADHNCWERPEDMDTPRTAFAVSRDFPGSEVSAEIAAALAASSVVYRKYHIGYSTRLLQRAIKVFDFADKYRGSYNDSLGPWVCPFYCDFSGYQDELVWGAAWLFKATKRPYYLDYIDKNIYNLKNFAEFGWDSKDAGINVLVSKLLINSSSNSKPFILNNADKFVCSVLPESPSVSVSYSPGGLLFKPGGSNLQHATAISFLFLVYAGYLKKTNKEIDCGGKVFASPKRLKQIARGQVDYILGSNPVNMSYMVGYGAKYPERIHHRASSLPSVDEHRGHIGCKGGSFYFHSQNPNPNLLVGAVVGGPDMKDSYADSRADFVHSEPTTYINAPLIGVLAYFNSHPS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1901 438 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 333 359 IPR018221 -
Gso9g1901 438 PANTHER ENDOGLUCANASE 1 437 - -
Gso9g1901 438 Pfam Glycosyl hydrolase family 9 2 430 IPR001701 GO:0004553|GO:0005975
Gso9g1901 438 PANTHER ENDO-1,4-BETA-GLUCANASE 1 437 - -
Gso9g1901 438 Gene3D - 1 437 IPR012341 GO:0005975
Gso9g1901 438 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 406 424 IPR033126 -
Gso9g1901 438 SUPERFAMILY Six-hairpin glycosidases 2 436 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1901 Gso-Chr9 43416344 43419305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1901 1 438 Glycoside Hydrolase AT1G70710 59.637 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1901 K01179 - gmx:100775752 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1901 9 43416344 43419305 Gso9g1901 9 43416344 43419305 ECH