Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1898 ATGGCAGCCATGAACCCTGATCTTGAGCATGCTCCACAAATTCCCTTGCTGAATCCTCCAACAGGGGAAAGTGGAAGGAGAACGCAAAAGGGTACCCTTGTTTTCATTGTCTCGATCGTTTTCCTATTGTCATTTATCATCATAAACCTTCAGAGCCATGAGCCCAGCTTAGAAAACAATATCACAACGGTGCCATTACTACCTATAGCTAGAGGGGTCGCTGAGGGTGTATCAGCCAAGTCAAATCCATATCTATCACAGAAAGCTTCATATAATTGGACAAATGCCATGTTATCTTGGCAAAGAACAGCTTTCCATTTTCAACCTCAAAGGAACTGGATGAACGATCCTAACGGTCCATTGTTTTACATGGGGTGGTACCATATATTTTACCAATACAATCCTGATTCAGCCGTGTGGGGCAACATAACATGGGGCCACGCTGTATCCAGAGACTTGATTCACTGGCTCTACCTTCCCATTGCGTTGGTTCCAGATAAGTGGTTTGACATCAGTGGTGTATGGTCAGGGTCAGCAACCCTTTTGCCAGATGGCAAAATCCTAATGCTCTACACGGGTAACACCGATCGAAACGTGCAAGTCCAAAATCTTGCGTACCCCGCCAACCTATCTGATCCCCTCCTCCTTGATTGGGTCAAATACGCTAATAATCCCGTCTTGGTGCCTCCACCAGGCATTGGGCCAAAAGATTTTCGTGACCCAACCACTGCGTGGATTGGGCCAGATGAGAAGTGGAGGATCACTATTGGGTCAAAGCTCAACAAGACAGGTCTTTCGTTGCTTTATAAAACCCAAGATTTCATCCACTATGAGCAAAGTGATCGCTATTTGCATCAAGTCCCGGGTACCGGCATGTGGGAGTGCGTTGACTTTTACCCGGTTTCAGTAAACGGGCCTAACGGTTTGGATACATCTGAAAATGGGCCAGATGTGAAGCATGTGTTGAAGGCTAGTTTGGATGACACTAAGGTGGATCATTATGCAATTGGGACCTACTTCATTGAAAATGATACATGGGTGCCCGATAACCCGAATGAGGATGTGGGTATCGGGTTGAAATTGGACTATGGGAGATACTATGCGTCAAAGACATTCTATGACCAACAAAAACAAAGAAGGATCCTGTGGGGTTGGATTAATGAATCAGATAGTGAAACCGCTGACTTGAAAAAGGGTTGGGCATCTCTCCAGACTATTCCAAGAACAGTTGTGTTTGACAAGAAGACTAGAACTAATTTGCTTCACTGGCCAGTGAAAGAAGTAGAAAGCTTAAGACTTAGCAACTCCGAATTTGAAGGAGTTGTGGTTAAACCTGGCTCAGTTGTGCCACTGGACATAGGCCCGGCCACACAGTTGGACATATTTGCTGAATTTGAAATCGAAGATTTAGCATCCAAAGGAATTGGCAAGGACAATGTAGACTGTGGAAATGGAGCTGTTGACAGAAGTGCTTTTGGACCATTCGGTATTTTGGCTATTGCAGATGACCAACTTTCTGAACTAACACCAATTTATTTCCATCTTTCTAGTACTACTAAAGATGGCAGTTTAACCACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCTCCTGATGTTTCAAAGCTCATTTTTGGAAGCAAAGCTCCAGTTCTCAGTGATGAAAAATTATCAATGAGGGTATTGGTCGACCATTCTATCATTGAGAGCTTTGCTCAGGGAGGGAGAACAGTGATCACATCTAGAGTTTATCCAACAGAAGCAATATATGGAGCTGCAAGATTGTTTCTGTTCAACAACGCGACGGACATAAACATCAAGGCCTCGCTCAAGATTTGGCAATTGAACTCAGCTTTCATACGCCCCTTCCCCTTTGACCAGAAGTTGTGA 1893 0.4427 MAAMNPDLEHAPQIPLLNPPTGESGRRTQKGTLVFIVSIVFLLSFIIINLQSHEPSLENNITTVPLLPIARGVAEGVSAKSNPYLSQKASYNWTNAMLSWQRTAFHFQPQRNWMNDPNGPLFYMGWYHIFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIALVPDKWFDISGVWSGSATLLPDGKILMLYTGNTDRNVQVQNLAYPANLSDPLLLDWVKYANNPVLVPPPGIGPKDFRDPTTAWIGPDEKWRITIGSKLNKTGLSLLYKTQDFIHYEQSDRYLHQVPGTGMWECVDFYPVSVNGPNGLDTSENGPDVKHVLKASLDDTKVDHYAIGTYFIENDTWVPDNPNEDVGIGLKLDYGRYYASKTFYDQQKQRRILWGWINESDSETADLKKGWASLQTIPRTVVFDKKTRTNLLHWPVKEVESLRLSNSEFEGVVVKPGSVVPLDIGPATQLDIFAEFEIEDLASKGIGKDNVDCGNGAVDRSAFGPFGILAIADDQLSELTPIYFHLSSTTKDGSLTTSFCVDETRSSKAPDVSKLIFGSKAPVLSDEKLSMRVLVDHSIIESFAQGGRTVITSRVYPTEAIYGAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFDQKL* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1898 630 MobiDBLite consensus disorder prediction 1 25 - -
Gso9g1898 630 Pfam Glycosyl hydrolases family 32 N-terminal domain 106 424 IPR013148 -
Gso9g1898 630 Gene3D - 436 616 - -
Gso9g1898 630 CDD GH32_Fruct1-like 112 410 - -
Gso9g1898 630 ProSitePatterns Glycosyl hydrolases family 32 active site. 106 119 IPR018053 GO:0004553|GO:0005975
Gso9g1898 630 SUPERFAMILY Concanavalin A-like lectins/glucanases 424 620 IPR013320 -
Gso9g1898 630 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 60 624 - -
Gso9g1898 630 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 60 624 - -
Gso9g1898 630 SUPERFAMILY Arabinanase/levansucrase/invertase 99 425 IPR023296 -
Gso9g1898 630 Gene3D Glycosyl hydrolase domain; family 43 110 435 IPR023296 -
Gso9g1898 630 Pfam Glycosyl hydrolases family 32 C terminal 427 615 IPR013189 -
Gso9g1898 630 SMART glyco_32 106 576 IPR001362 GO:0004553|GO:0005975
Gso9g1898 630 Pfam Beta-fructofuranosidase, N-terminal domain 21 98 IPR021792 GO:0004564
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1898 Gso-Chr9 43387899 43392841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1898 13 624 Glycoside Hydrolase AT1G12240 59.306 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1898 K01193 - gmx:100814788 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1898 9 43387899 43392841 Gso9g1898 9 43387899 43392841 ECH