Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1538 ATGGAAGCTGCATTATGCAGTGCACTTGCTCTTTCACCCAATCAAGTATTCAATGCAGCAAATCCTGGAGATAAAAATGTTCCTTTGAAATATAGCAAAGATCGGAGTGTTGTAATGACAGTGGCAGCCACTGGAATATTAGGGAAAGGTGGTGGGTTGTTGGAGAGGCCAACCATAGAGACAACATCACCTGGTCGGGAATCTGAATTTGACTTAAGGAAATCGCGGAAAACATCCCCACCTTACCGAGTTTTGCTGCACAATGACAACTTCAACAAGCGAGAATATGTTGTGCAAGTGTTGATGAAGGTGATACCTGGAATGACAATTGATAGTGCGGTTAACATCATGCAGGAGGCACATTATAATGGACTAGCAGTGGTGATAGTATGTGCTCAAGTGGATGCTGAAGACCACTGCATGCAGTTAAGAGGAAACGGCCTTCTAAGTTCAATTGAGCCAGCTGATGGTGGTGGTTGTTGA 483 0.441 MEAALCSALALSPNQVFNAANPGDKNVPLKYSKDRSVVMTVAATGILGKGGGLLERPTIETTSPGRESEFDLRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTIDSAVNIMQEAHYNGLAVVIVCAQVDAEDHCMQLRGNGLLSSIEPADGGGC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1538 160 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Gso9g1538 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 158 IPR022935 GO:0006508
Gso9g1538 160 Gene3D - 76 154 IPR014719 -
Gso9g1538 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 158 - -
Gso9g1538 160 SUPERFAMILY ClpS-like 76 153 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1538 Gso-Chr9 39634763 39637118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1538 K06891 - gmx:100785379 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0770 7 8473668 8476119 Gso9g1538 9 39634763 39637118 GST