Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1439 ATGGTGAATAGGCCAAACAGTTTGGAGCTTTTGAATGCCATTCTCTATCTCTTGGGTTTATCTCTAGCTATCTACATTGTTGAGAGTGGTACAACATCATTGCTTAGAATCATCAATGCACCTTTCCATCACGAGCTCTACTTCGCTTTGCATGAGATTATCAGGTCAAACTTGCCAGTTGCCACAACATGTGAAAAATTGTCACGACAGGAAAGCAATTCAAAGATTTTAGTTGTTTTGCATGATGATCCGACAGGAAAACAAACTGTTCATGATATTGAATATTTGACAGAATGGACCATTGAGTCACTGATTGAGCAGTTTAGAAAAAGTCCAAAATGCTTTTTCATTTTGAAAAATTCCAGGTCACTGAGTTCTGACAAGGCCAGTGCATTGATAAAAGAGATTTGCAGAAATCTGGACGCTGCAGCAAAATCAGTTGACAACATTGACTATACCGTAGTTTTGAGGGGAGATTCAACTTTACGTGGCCATTTTGATGAAGCAGATGTTGTTTCAGTATTGGGTGATATGGATGCATGGATAATTTGCCCCTTTTTCCTTCAAGGAGGTCGTTACACTATTGAAAACATACACTATGTTGATGATTCTGACAGGCTTGTTCCTGCCGGGGACACTGAGTTTGCCAAAGATGCTTCCTTTGGCTACAAATCTTCAAACCTGTTGGGAGAGGAGAAAACAAATGGCCGAATACTTGGAAGTAGGGTTGCATCGATTTCTATCCAACTTTTGAGGAAAGGTGGTCCAGACGCAGTTTGTCGGCATCTATGCAGTTTGCAGAAGGGGTCAATATGCATAGTTAATGCAGCTAGTGAAAGAGACATGACTGTATTTGCACTTGGAATGATCAAGGCAGGATTGATGGGAAAACGTTTCTTGTGTCGCACTGCTGCTAGTTTTGTTTCTACACTTATGGGAATCATCTCTAAGCCTCCAATATTGCCAAATGATATAGGAATAGATAGAGAAAGGAATGGTGGTTTGATAGTTGTGGGATCCTATATTCCGAAAACAACAAAGCAGGTTGAAGAGCTCAAATTACAGTGTGGTCAGTTCTTAAAAAGCACTGAGGTATCAGCTGAAAAACTTGCAATGAGTCCTATTGAGGAGAGGGAGGAGGAAATCAGTAGAACAGCTGAATTAGCAGATGTATATCTTAAAGCTCATAAAGACACTCTAATAATGACCAGCCGAAATCTCATAACTGGAAGAACTGCCACTGAGAGTTTGGACATTAAGTTTAAAGTGGGCTCTGCTTTGGTGGAAATAGTGAAAAGAATAACTACAAAACCTCGCTATGTAATTGCAAAGTACATTTTCTGGGGTGGTATTACATCTTCAGACCTTGCTACAAAAGCCCTTGGTGCAAGATATGCGAAGATAGTTGGACAAGCACTTGCTGGTATTCCGTTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGAGTTCCTTACATTGTCTTCCCTGGTAATGTTGGTAACAGCACAGCATTTGCAGAAGTTGTAAAGTCCTGGACTAGTCCAATCAGACTTACATCAACAAAAGAAATTATCAACAATGCAGAAAAGGGTGGATATGCTGTTGGAGCATTTAATGTCTATAATTTGGAAGGAGTTGAGGCTGTTGTTTCAGCTGCAGAGGAAGAAGAAAGTCCTGCTATATTACAGGGAGAATCTCTTATGTTTGGGATCTTATTGATGAGATGCATGATAGAGGGAATTCGACCAGATGTGTACACATTAAATATACTTCTTGATGGATTATGCAAAGGCAAAAGACTTAAGATTGCACAAGGGGTTTTTCAAGATCTTTTGGTTAAAGGCTATCGTATAAATGTCTACACGTATACTATTATGATTAATGGGCTTTGTAATCAGGGCTTGCTTGATGAAGCATTGGCCATGCTGTCAAAAATGGAAGACAAAGGTTGCATCCCTAATGCTGTTACTTTTGAAATACTCATTTGTGCTCTCTTTGAAAAAGATGGAAATGATAAGGCAGAGAAACTTCTTCATGAAATGATTGCTAGAGGCTTGTTGTAA 2064 0.3963 MVNRPNSLELLNAILYLLGLSLAIYIVESGTTSLLRIINAPFHHELYFALHEIIRSNLPVATTCEKLSRQESNSKILVVLHDDPTGKQTVHDIEYLTEWTIESLIEQFRKSPKCFFILKNSRSLSSDKASALIKEICRNLDAAAKSVDNIDYTVVLRGDSTLRGHFDEADVVSVLGDMDAWIICPFFLQGGRYTIENIHYVDDSDRLVPAGDTEFAKDASFGYKSSNLLGEEKTNGRILGSRVASISIQLLRKGGPDAVCRHLCSLQKGSICIVNAASERDMTVFALGMIKAGLMGKRFLCRTAASFVSTLMGIISKPPILPNDIGIDRERNGGLIVVGSYIPKTTKQVEELKLQCGQFLKSTEVSAEKLAMSPIEEREEEISRTAELADVYLKAHKDTLIMTSRNLITGRTATESLDIKFKVGSALVEIVKRITTKPRYVIAKYIFWGGITSSDLATKALGARYAKIVGQALAGIPLWQLGPESRHPGVPYIVFPGNVGNSTAFAEVVKSWTSPIRLTSTKEIINNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEESPAILQGESLMFGILLMRCMIEGIRPDVYTLNILLDGLCKGKRLKIAQGVFQDLLVKGYRINVYTYTIMINGLCNQGLLDEALAMLSKMEDKGCIPNAVTFEILICALFEKDGNDKAEKLLHEMIARGLL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1439 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 584 618 IPR002885 -
Gso9g1439 687 Gene3D Aldolase class I 513 567 IPR013785 -
Gso9g1439 687 TIGRFAM PPR: pentatricopeptide repeat domain 621 655 IPR002885 -
Gso9g1439 687 Gene3D Tetratricopeptide repeat domain 568 684 IPR011990 GO:0005515
Gso9g1439 687 Pfam Nucleotide-binding C-terminal domain 335 505 IPR031475 -
Gso9g1439 687 SUPERFAMILY Aldolase 519 565 - -
Gso9g1439 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 654 687 IPR002885 -
Gso9g1439 687 PANTHER ALDOLASE-RELATED 71 578 - -
Gso9g1439 687 Pfam Sugar-binding N-terminal domain 77 311 IPR010737 -
Gso9g1439 687 SUPERFAMILY YgbK-like 77 509 - -
Gso9g1439 687 Pfam PPR repeat 649 681 IPR002885 -
Gso9g1439 687 Gene3D - 326 512 IPR042213 -
Gso9g1439 687 Pfam Fructose-bisphosphate aldolase class-II 520 566 IPR000771 GO:0005975|GO:0008270|GO:0016832
Gso9g1439 687 Pfam PPR repeat family 583 632 IPR002885 -
Gso9g1439 687 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 71 578 - -
Gso9g1439 687 Gene3D - 76 312 IPR037051 -
Gso9g1439 687 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 619 653 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1439 Gso-Chr9 38434353 38452347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1439 580 687 Glycosyltransferase AT1G05670 30.556 1.79e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1439 - - gmx:100779987 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0871 7 9938239 9962629 Gso9g1439 9 38434353 38452347 GST