Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1249 ATGGGGTGGTACAGAAGGGGAAAGCTCGCTCTTGATCATTTTCGTAGATTGGCTTCAAGGGTTACCCCTCAAAATCCAATTTTTCAGCGTGGTGCGAGGATTTGCTCATCTGGGTATTTGGATTCAGGTTCTAAAGTAGCTAGCTTTAATGGGTTCTCTTCTTTTTGTTCAACTTCTCAGAGATTAGGCACACGGGGTGTTGTTGGAGTTAACAGGAACTTTCACAATTCGGTTCTTTTTGGGGCTAAGAGATTTTACTATGTTGACCCTCGCAATGTGCGTCATTTCAAGCCAAGAGGGCCATGGCATTGGTTTGAGAATCCTAGGCATGTTTTCATTGTTGTGATGGTTGGTTCAGGGGTTTTAATCACTGTGTATTTTGGTAACATAGAAACAGTTCCTTACACAAAGCGAACCCATTTGATTCTGTTGTCGAAAGCCATGGAGAGGAAGCTTGGGGAGAGCGAGTTTGAACAAATCAAGACTGGTTTTAAGGGGAAGATATTGCCTCCTATACATCCTGAGAGTGTGAGAGTGACAATGATTGCCAAGGATATAATTGATGCATTGCAGAGAGGGTTGAGGAAGGAGGAACAAGTGTGGAGTGATTTGGGGTATGCATCAGAGCATGCTATGCTGGTTGAAGGGGATGGAAGGGAGACATTGAATGCATTGGCTGGGAGTGAAGAGAAGATTGAAGGGAATTGGGCCAAGGAGGATGAGATTCTTGACGATAAATGGATTCAGCAGAGCCGGAAAAAGGGTCAGGAAAGAGGGTCACAAGCTGCAACATCACATTTGGATGGGTTAAATTGGGAGATTTTGGTGGTAAATGAGCCTGTTGTTAATGCCTTCTGCTTACCTGGTGGGAAGATAGTTGTGTTCACTGGTTTGTTAGAGCATTTTAAAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTTGGGCATGCTGTTGCAAGACATGGTGCTGAGGGGATTACCAAGAACTTGTGGTTTACTATTCTACAGTTGATACTTTATCAATTTGTTACACCTGATATTGTCCACACAATGTCATCCCTTTTCTTGCGCCTACCTTTCTCCAGGCGGATGGAAATAGAAGCTGATTACATTGGGCTGCTGTTAATTGCATCAGCTGGCTATGATCCGCGGGTGGCACCCAAAGTGTATGAGAAGCTGGGAAAAATCACTGGTGGTAATTCTGCCATTGGGGATTATCTCTCTACTCATCCTTCTGGTAAAAAAAGAGCAGAATTGTTGGCCCAAGCTAATATAATGGAAGAAGCAGTTACTATATATAGAGATGTAAGAGCAGGACGTGGGGTTGAAGGTTTTCTTTAG 1347 0.435 MGWYRRGKLALDHFRRLASRVTPQNPIFQRGARICSSGYLDSGSKVASFNGFSSFCSTSQRLGTRGVVGVNRNFHNSVLFGAKRFYYVDPRNVRHFKPRGPWHWFENPRHVFIVVMVGSGVLITVYFGNIETVPYTKRTHLILLSKAMERKLGESEFEQIKTGFKGKILPPIHPESVRVTMIAKDIIDALQRGLRKEEQVWSDLGYASEHAMLVEGDGRETLNALAGSEEKIEGNWAKEDEILDDKWIQQSRKKGQERGSQAATSHLDGLNWEILVVNEPVVNAFCLPGGKIVVFTGLLEHFKSDAEIATIIGHEVGHAVARHGAEGITKNLWFTILQLILYQFVTPDIVHTMSSLFLRLPFSRRMEIEADYIGLLLIASAGYDPRVAPKVYEKLGKITGGNSAIGDYLSTHPSGKKRAELLAQANIMEEAVTIYRDVRAGRGVEGFL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1249 448 PANTHER METALLOENDOPEPTIDASE OMA1 83 440 - -
Gso9g1249 448 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 83 440 - -
Gso9g1249 448 CDD M48C_Oma1_like 268 431 - -
Gso9g1249 448 Gene3D Metalloproteases ("zincins"), catalytic domain 250 327 - -
Gso9g1249 448 Pfam Peptidase family M48 262 423 IPR001915 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1249 Gso-Chr9 35933684 35937146 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1249 K23010 - gmx:100799127 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1249 9 35933684 35937146 Gso9g1249 9 35933684 35937146 ECH