Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1101 ATGGAGACACCTTTAGTGACCGAAAAGTTCACTTCAGAATCTGACTACTTGCCGGTGAAAAGCTTGAAGGATGTTAAGTTTGTTTTGTGGACAGAAACAGTGAAGATATGGAGAATAGCATTCCCTATGGCACTGTCTGCACTGTTTCAGTTTCTCACAATCTCCTCAACTTCCATCTATGCTGGCCATATTGGAGACATTGAACTCTCTTCTATCTCTGTTTACCAAGGTGTCATCAGTGCCCTCTATTTTTACTTGTTGTTTGGTATGTCATCTGCATTGGTTACACTATGTGGCCAAGCTTATGGAGCAGGGCAAATTCAATCAACATGTATTTATGTTCAAAGATCATGGATTATACTTACTGCCACTTGTATAATCCTCTTACCTATTTATGTATACGCCACACCAATCTTAAATTTTATTGGCCAAGACCAAGAAATAGCTGATCTTGCCGGAAGATATTCTATACAAGTAATTCCCTACATGTTTTCCTGTGCAATAGCTTTTCCCTTTCAGACATTTCTTCAGTCCCAGATCAAGGTTAAAGTTATTACTTGCATAGCACTTGCTGTTTTGGTCATACAAAATGTGCTGCTTTACATCTTCATAAATGTATTTGGTTGGGGTACAACTGGCTTAGCCATGGTGACTAATATCATAGGGTGGGTTTATGCTGCGGCTTTGGTTGTGTATACCATTGGTTGGTGTAAGGAAGAATGGACTGGATTTTCATGGATGGCATTTAGGGATTTGTGGTCATTTGCTAAGTTAAGCCTTGCATCATCTGTTATGAGTTGCTTAGACCAATGGTATAGTACATGCATTATTCTCCTTGCTGGTCTACTAGACAATCCTGTGATTGATGTTGGTTCCTATTCTATTTGCTTTAATGTTCAGGGTTGGCACTCGATGCTGCTTCTTGGAATAAGTGCTGCCATAAGTATTCGTGTCTCCTATATACTTGGCAAGTCGCATCCAAGAGCAGCCATATACTCTTTCTGCGTGACAATGTTTCAGTCTCTCCTCCTCGGCATTGTTTTCATGACTGTCATTTTCTTGAGTAAAGATGAGTTTGCCAAGATCTTTACCAACAGTAAGGATATGATTCGAGCTGTTGCTGATTTAGCATACCTTCTTGGCGTATCAATGGTTATCAATAGTGCTTCACATGTGATGTCAGGCGTGGCCGTGGGGAGTGGATGGCAAGTTATGGTTGGTTACATAAACCTTGCATGTTATTACATTGTTGGACTCCCCATTGGAATTTTCCTTGGTTTCAATCAACATTTAGGGGTCAAGGGTCTCTGGGGAGGCACCATGTGTGGCAGGATTCTTCAAATGTTAGTCCTCTTAGTCATTATTTGGAAGACCAACTGGTCCAAGGAGGTGGAGCAAACAGCTCATCGCATGAGAATATGGAGCATCAACAACCTCCACTCGGATGCCATGGGAAATGTTACATGA 1467 0.4117 METPLVTEKFTSESDYLPVKSLKDVKFVLWTETVKIWRIAFPMALSALFQFLTISSTSIYAGHIGDIELSSISVYQGVISALYFYLLFGMSSALVTLCGQAYGAGQIQSTCIYVQRSWIILTATCIILLPIYVYATPILNFIGQDQEIADLAGRYSIQVIPYMFSCAIAFPFQTFLQSQIKVKVITCIALAVLVIQNVLLYIFINVFGWGTTGLAMVTNIIGWVYAAALVVYTIGWCKEEWTGFSWMAFRDLWSFAKLSLASSVMSCLDQWYSTCIILLAGLLDNPVIDVGSYSICFNVQGWHSMLLLGISAAISIRVSYILGKSHPRAAIYSFCVTMFQSLLLGIVFMTVIFLSKDEFAKIFTNSKDMIRAVADLAYLLGVSMVINSASHVMSGVAVGSGWQVMVGYINLACYYIVGLPIGIFLGFNQHLGVKGLWGGTMCGRILQMLVLLVIIWKTNWSKEVEQTAHRMRIWSINNLHSDAMGNVT* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1101 488 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Gso9g1101 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 476 - -
Gso9g1101 488 TIGRFAM matE: MATE efflux family protein 42 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g1101 488 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g1101 488 Pfam MatE 262 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g1101 488 PANTHER PROTEIN DETOXIFICATION 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1101 Gso-Chr9 31700496 31704234 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1101 K03327 - gmx:100813527 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1101 9 31700496 31704234 Gso9g1101 9 31700496 31704234 ECH