Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0728 ATGGAAGGAGGAGTGCCTGAAGCTGATATCTCTGCCTTTAGAGAATGTTTGTCTCTATCATGGAAAAATCCTTATGTTCTTCGCCTTGCTTTCTCCGCTGGAATTGGAGGCTTTCTCTTTGGCTATGACACAGGAGTCATATCTGGAGCACTTTTGTACATCAGAGATGATTTCAAAGAGGTGGATAGAAAGACGTGGCTGCAGGAAGCTATAGTGAGTATGGCACTTGCTGGAGCAATCATAGGAGCTTCAGTTGGTGGATGGATCAACGATCGATTTGGGAGAAAGAAAGCAATCCTTTTGGCAGATACCCTCTTTTTTATAGGGTCTATTGTGATGGCTGCTGCTATAAACCCAGCTATTCTGATTGTTGGTCGAGTTTTCGTTGGCCTTGGGGTTGGAATGGCCTCAATGGCCTCACCTTTGTACATCTCAGAAGCATCACCAACAAGAGTTCGAGGTGCCCTTGTTAGTCTCAATGGATTCCTCATCACTGGAGGACAGTTCCTTTCCTATGTCATCAACTTGGCCTTCACAAGCGCACCAGGAACATGGAGGTGGATGTTAGGAGTAGCAGCAGTACCAGCATTGACACAAATCATATTGATGGTTTTGCTCCCAGAATCACCTCGTTGGTTGTTCAGAAAGGGTAAACAAGAAGAAGCCAAAGAAATTTTGAGGAGGATTTACCCTCCCCAGGATGTTGAAGATGAAATCAATGCTTTGAAGGAATCAATTGAAACGGAACTCAATGAAGAAGCTTCAGCTTCAAACAAAGTCAGCATAATGAAGCTGCTGAAAACCAAAACTGTGAGAAGAGGTTTATATGCTGGAATGGGCCTTCAAATCTTCCAACAATTTGTGGGGATTAACACTGTTATGTACTACAGCCCCACAATTGTGCAATTAGCTGGTTTTGCATCAAATAGGGTTGCACTACTTCTATCACTTGTCACTGCAGGGCTTAATGCATTTGGTTCCATTTTAAGCATATATTTCATTGACAAGACTGGGAGGAGGAAGCTTTTGTTGTTTAGTTTGTGTGGTGTTGTGGTCTCACTTGTTGTTTTGACCGTGGCTTTTCATGAGACTACCACTCACTCCCCTATGGTCAGCACAATCGAAACCTCTCACTTCAACAACACATGCCCTGATTACAGCACTGCTTTCAACCCTGGTGAATGGGATTGCATGAAATGCCTCAAGGCCTCTCCAGAATGTGGCTTTTGTGCCTCTAGAGCTAATAAGCTCTTACCTGGGGCATGCTTGATTTCCAATGACACAACAGAAAATCAATGTCAAAAAGAGGACAGGCTATGGTACACTAGGGGATGTCCTAGCCAATATGGTTGGCTTGCATTAGTTGGCCTAGCACTCTACATCATATTCTTCTCACCTGGCATGGGAACAGTTCCATGGGTTGTTAACTCTGAGATCTATCCTCTAAGATACAGAGGAATCTGTGGGGGGATGGCATCTACCTCAAATTGGGTCTCTAATCTCATTGTGGCCCAGTCCTTTCTGTCCTTGACACAAGCCATTGGGACCTCATCTACATTCATGATATTCATATTCATCACTGTTGCAGCCATTGTGTTTGTCATTATTTTTGTGCCAGAAACCAAAGGACTTCCGATTGAGGAAGTGGAAAACATGCTGGAAAGAAGATCTTTGAACTTCAAGTTTTGGCAGACAAGTCCTGACTCTAATGATATACCAATAAAGCAGAAGAATCAGTCAGTTTGA 1746 0.4347 MEGGVPEADISAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFKEVDRKTWLQEAIVSMALAGAIIGASVGGWINDRFGRKKAILLADTLFFIGSIVMAAAINPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTSAPGTWRWMLGVAAVPALTQIILMVLLPESPRWLFRKGKQEEAKEILRRIYPPQDVEDEINALKESIETELNEEASASNKVSIMKLLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRVALLLSLVTAGLNAFGSILSIYFIDKTGRRKLLLFSLCGVVVSLVVLTVAFHETTTHSPMVSTIETSHFNNTCPDYSTAFNPGEWDCMKCLKASPECGFCASRANKLLPGACLISNDTTENQCQKEDRLWYTRGCPSQYGWLALVGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTQAIGTSSTFMIFIFITVAAIVFVIIFVPETKGLPIEEVENMLERRSLNFKFWQTSPDSNDIPIKQKNQSV* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0728 581 Pfam Sugar (and other) transporter 30 366 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso9g0728 581 Pfam Sugar (and other) transporter 448 552 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso9g0728 581 Gene3D MFS general substrate transporter like domains 437 560 IPR036259 -
Gso9g0728 581 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 369 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso9g0728 581 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 542 IPR020846 GO:0022857
Gso9g0728 581 SUPERFAMILY MFS general substrate transporter 18 550 IPR036259 -
Gso9g0728 581 Coils Coil 239 259 - -
Gso9g0728 581 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso9g0728 581 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso9g0728 581 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso9g0728 581 PRINTS Sugar transporter signature 454 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso9g0728 581 PRINTS Sugar transporter signature 477 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso9g0728 581 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 566 - -
Gso9g0728 581 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso9g0728 581 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 566 - -
Gso9g0728 581 CDD MFS_HMIT_like 32 540 - -
Gso9g0728 581 Gene3D MFS general substrate transporter like domains 20 380 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0728 Gso-Chr9 11043750 11051160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0728 1 580 Organic Solute Cotransporters AT1G30220 70.890 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0728 K08150 - gmx:100783605 1116.29