Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0562 ATGGGGGAAGAAGAAGAAGAAGAAGTGAGCGTCACCGCTTTGCATCATCCAAACAGCGGAAACGATGATCAGAGCCTCGAATTCGATATATATCCTTTGAGCAGTTACTATTTTGGATCCAAAGATGCTGTTCCCTCCAAAGACCTCACCTTAGTTGATCGTGTTCTCAGGATGAAGTCCAACTATGCTGCCAGTGGAATACGAACCTGCGTGGAAGCTGTCTTACTGGTTGAATTGTTCAAACATCCTCATTTGTTGCTGTTGCAAATAAGAAATTCCATATATAAACTTCCTGGTGGCCGATTAAGGCCAGGTGAATCAGATACTGATGGGTTGAAGCGTAAGCTGGCAAGGAAGCTCTCTGTGAATGAAGATGGGGACGGGTCAGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGGCCTGATTTTGAAACATTAATGTATCCCTTCATTCCACCTAATGTAAAAAAGCCAAAGGAGTGTACCAAAGTCTTCCTTGTGAAGCTGCCAGAGAGTAGAAAGTTCATTGTGCCTACAAACATGAGGGTGCTTGCAGTTCCGTTGTGCCAAGTTCATGAAAATCACAAGACATATGGGCAAATTATATCAGGGGTCCCACAGCTGCTGTCAAAATTCTCTTTCAACATGATAGAATCTTGA 666 0.4399 MGEEEEEEVSVTALHHPNSGNDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLVELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSEWEVGECLGMWWRPDFETLMYPFIPPNVKKPKECTKVFLVKLPESRKFIVPTNMRVLAVPLCQVHENHKTYGQIISGVPQLLSKFSFNMIES* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0562 221 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 4 220 - -
Gso9g0562 221 MobiDBLite consensus disorder prediction 1 25 - -
Gso9g0562 221 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 4 220 IPR016706 GO:0003729|GO:0005849|GO:0006378
Gso9g0562 221 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 27 218 - -
Gso9g0562 221 Pfam Nucleotide hydrolase 28 214 IPR016706 GO:0003729|GO:0005849|GO:0006378
Gso9g0562 221 SUPERFAMILY Nudix 72 184 IPR015797 -
Gso9g0562 221 PIRSF CPSF-25 2 221 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0562 Gso-Chr9 6445064 6448799 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0562 K14397 - gmx:100791216 446.817