Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0495 ATGGCATTTGCATATAAACCATTGCATCTTCTTTTGCTGTTATCCTTCTCAACATGTTGTTTCTCATCAACTAGCACCGTTTCATCGGCTAAACCTCGGAGACTGGTCTCCAAACTCATTCACCCTGGCTCAGTTCACCATCCCCACTACAAGCCAAATGAAACAGCCAAAGACCGAATGGAACTCGATATCGAACACTCGGCTGCACGTTTAGCCTACATACAAGCGAGGATAGAAGGTTCTTTGGTCTATAATAATGACTACACAGCTAGTGTTTCTCCCTCCTTAACTGGCAGAACCATACTGGTCAATCTCTCAATAGGCCAACCCTCCATCCCACAACTAGTAGTTATGGACACTGGCAGTGACATCTTGTGGATCATGTGCAACCCTTGCACAAACTGTGACAACCATTTAGGTCTACTCTTTGACCCCTCAATGTCTTCCACCTTTTCCCCACTGTGCAAAACACCCTGTGGCTTCAAGGGCTGTAAATGTGACCCTATTCCTTTCACCATCTCTTATGTGGACAACTCCTCTGCCTCAGGAACATTTGGCCGCGACATTCTTGTCTTCGAGACAACAGATGAAGGTACCTCTCAGATATCTGATGTAATAATTGGATGTGGTCACAACATCGGATTTAATTCGGATCCCGGGTACAATGGAATACTAGGACTAAACAATGGACCTAACTCTTTGGCAACACAAATTGGCCGAAAGTTCTCTTACTGCATAGGCAACCTGGCTGATCCATATTACAATTACAACCAATTGAGACTAGGTGAAGGGGCAGATCTTGAAGGCTATTCCACACCTTTTGAAGTGTACCATGGCTTTTATTATGTCACCATGGAAGGCATAAGTGTAGGGGAAAAAAGGCTTGACATAGCTCTAGAAACATTTGAGATGAAAAGGAATGGCACAGGTGGAGTGATCCTTGACTCAGGGACCACTATCACCTACCTAGTTGACAGTGCGCATAAATTACTATACAATGAAGTTAGAAATCTCCTTAAATGGTCCTTTAGACAAGTTATATTTGAAAATGCTCCATGGAAGCTGTGTTATTATGGGATTATAAGTAGAGATCTAGTTGGGTTTCCAGTGGTTACATTCCATTTTGTTGATGGAGCAGATTTGGCTTTGGACACAGGAAGCTTTTTTAGTCAACGCGATGACATATTTTGCATGACTGTAAGTCCAGCCAGCATCCTTAACACTACAATTAGTCCTTCAGTTATTGGATTGCTAGCCCAGCAGAGCTACAACGTGGGATATGACCTAGTTAATCAATTTGTTTACTTCCAAAGAATTGATTGTGAACTTCTTAGCGGTTGA 1341 0.4273 MAFAYKPLHLLLLLSFSTCCFSSTSTVSSAKPRRLVSKLIHPGSVHHPHYKPNETAKDRMELDIEHSAARLAYIQARIEGSLVYNNDYTASVSPSLTGRTILVNLSIGQPSIPQLVVMDTGSDILWIMCNPCTNCDNHLGLLFDPSMSSTFSPLCKTPCGFKGCKCDPIPFTISYVDNSSASGTFGRDILVFETTDEGTSQISDVIIGCGHNIGFNSDPGYNGILGLNNGPNSLATQIGRKFSYCIGNLADPYYNYNQLRLGEGADLEGYSTPFEVYHGFYYVTMEGISVGEKRLDIALETFEMKRNGTGGVILDSGTTITYLVDSAHKLLYNEVRNLLKWSFRQVIFENAPWKLCYYGIISRDLVGFPVVTFHFVDGADLALDTGSFFSQRDDIFCMTVSPASILNTTISPSVIGLLAQQSYNVGYDLVNQFVYFQRIDCELLSG* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0495 446 Gene3D Acid Proteases 85 252 IPR021109 -
Gso9g0495 446 CDD pepsin_A_like_plant 102 441 IPR034161 -
Gso9g0495 446 SUPERFAMILY Acid proteases 102 441 IPR021109 -
Gso9g0495 446 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Gso9g0495 446 Gene3D Acid Proteases 269 444 IPR021109 -
Gso9g0495 446 PANTHER OS07G0603500 PROTEIN-RELATED 25 443 - -
Gso9g0495 446 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 25 443 - -
Gso9g0495 446 Pfam Xylanase inhibitor C-terminal 281 437 IPR032799 -
Gso9g0495 446 Pfam Xylanase inhibitor N-terminal 102 248 IPR032861 -
Gso9g0495 446 ProSiteProfiles Peptidase family A1 domain profile. 101 437 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0495 Gso-Chr9 5303446 5304851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0495 103 444 Miscellaneous Gene Families AT1G44130 24.064 5.25e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0495 - - gmx:100779317 881.322