Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0467 ATGACAATGCAAATCTCAAGTAAAACATTTGATCGAGCACCAAGTATTCGGCAGCTATTTCCACCCAAAAATCTTGAGGAAGGCAACGGATGTGACACATGTTCTGTTCAGTTCATCAACCATCAATGTGACACACCAGAAAGCAGAATCCATCAATGCTATAGTTCAAAACCACTTATGTTAGAAGATGGGACTCCTAGCCCCAGAAATTCCATATCTTCTATTCCTTCCAATTCCATTGAACATGCTGTATCAATATATCAACAAGTTGATCGGTCAAGTACTTCTGCGATTTCACCTCTTCAAGTTAATGATCAAATGGTTATTCAACACATTAATTCTTCAGAACCCCCCTCAAGTTCATTTCCGGCCTTCAGAGATAAAGTACCAATGAATCTTCACATGTATTTGCCCTTATATAGAGCTTCATTGAAAGGTGATTGGGAGAAGGCCAATGAGTTCCTAAATTTGCATCCTGGTGCGGAGAATGCCATGATTTCAAGAGGGTGGGAAACAGCTCTTCATATTTCAGCTGGGGCTCGACGCACCAAATTTGTGGAGGAACTTGTCAAAAGAATGAGAACTACAGACTTGGAAATTCAAAACAAAGATAACAACACTGCACTTTGTTTTGCTGCTGCATCTGGGGTTACCAAGATAGCAAAGCTGATGGTTGATAGGAATAGAAACTTGCCAGTTATACGAGGTAGTGAAGGTGTGACACCACTTTATATAGCTACATTACTGGGCCAAAGGGACATGGTTTGGTATCTCTATTCAGTGACCAATCATGAGATTCTAAAAACTGAAGACTACTTTAGCCTATTGATTGCTGCTATATCTACAGATTTATATGATTTTGCCTTACATGTACTTGAGTGTCAACCACAATTAGCAACTTATCATGGTTTGAATGGGGAGACAGCTTTACACGTGTTAGCAAAAAAACCTTCATCATTTACCAGTGGCATTCAACTAGGAATCTGGGAAAGATGCATCTATCCATGGATCCAAGTCAAACTAGCAAATGACTATAGATGCCAGTCTAGCATCTTCCAATCCCAGGCACCTTTGACTTTTCAAGATAACCTATTGGTGACTGGACTCTGTCAGGCTGTCAAATATATTGTACCAGGATTTGAAGCAGTTCAGAAGAAAAAGACATTGAACGCACAGGCATTAAAGTTAGTGCAACGTCTTTGGGAACTGATAGTGTCTTCAGACGAAATACAACATGGAGACTTAATTAAAAGCCCTTTGTCACGGCCCCTATTTATTGCTGCTGAATCTGGGATACCTGAGATTGTAATTGAGCTTCTTTACTCATATCCAGATCTACTTTGGAAAGTTGACGGCCAAAATAGAAGTCTTTTTCACATTGCAATCATGCATCGTCAGGAGAAAATATTTAACCTGATTTATGACATAGGGGCACACAAGGATCTGATAACTTCATACAGAGATAATAACAATCACAATATACTGCATTTGGCTGGAAAATTGGCCCCTTCAGAACAACTTCATGTTGTATCTGGTGCAGCGCTGCAGATGCAAAGGGAATTATTGTGGTTCAAGGAGGTGGAAAAGATCATACAGCCTCTATTCAAGGAGATTAAGGATTCTCAAGGTAGGACACCTCAAATGTTATTCACTGAGGAACACAAGGAGTTGGCCAAAGAAGGAGAGAAGTGGCTGAAGAACACTGCTTCATCATGCATGCTAGTTGCAACACTTATTACCACTGTGATGTTTGCAGCAATCTTTACAGTACCAGGCGGGAACAACAACAATAATGGATATCCCATTTTTATGCACACTACATCCTTCAAAGTTTTCGCTCTCTCAGATGCTCTTGCATTGTTCTCCTCAGTAATATCTGTATTGATGTTTTTGTCCATACTCACCTCAAGATATGCACAGGAAGATTTCCTTGTGTCACTACCTAGAAGGTTGAGTGTTGGCATTGCAACCCTTTTCTTCTCCATCATTACAATGCTCATAGCTTTTGGTGCAACATTTTTCATTGTACTTGGACATCAATTGGCTTGGATTGTCATTCCAACAACCCTTGTTGCTTGTATCCCTGCAATATTGTTTGCCCTTTTACAGTTTCCTCTTCTTGTTGATACAATCTCATGTACATATGGAGCTGGCGTATTTTCTCGTTGA 2169 0.4002 MTMQISSKTFDRAPSIRQLFPPKNLEEGNGCDTCSVQFINHQCDTPESRIHQCYSSKPLMLEDGTPSPRNSISSIPSNSIEHAVSIYQQVDRSSTSAISPLQVNDQMVIQHINSSEPPSSSFPAFRDKVPMNLHMYLPLYRASLKGDWEKANEFLNLHPGAENAMISRGWETALHISAGARRTKFVEELVKRMRTTDLEIQNKDNNTALCFAAASGVTKIAKLMVDRNRNLPVIRGSEGVTPLYIATLLGQRDMVWYLYSVTNHEILKTEDYFSLLIAAISTDLYDFALHVLECQPQLATYHGLNGETALHVLAKKPSSFTSGIQLGIWERCIYPWIQVKLANDYRCQSSIFQSQAPLTFQDNLLVTGLCQAVKYIVPGFEAVQKKKTLNAQALKLVQRLWELIVSSDEIQHGDLIKSPLSRPLFIAAESGIPEIVIELLYSYPDLLWKVDGQNRSLFHIAIMHRQEKIFNLIYDIGAHKDLITSYRDNNNHNILHLAGKLAPSEQLHVVSGAALQMQRELLWFKEVEKIIQPLFKEIKDSQGRTPQMLFTEEHKELAKEGEKWLKNTASSCMLVATLITTVMFAAIFTVPGGNNNNNGYPIFMHTTSFKVFALSDALALFSSVISVLMFLSILTSRYAQEDFLVSLPRRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIVIPTTLVACIPAILFALLQFPLLVDTISCTYGAGVFSR* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0467 722 SUPERFAMILY Ankyrin repeat 138 314 IPR036770 -
Gso9g0467 722 Gene3D - 131 324 IPR036770 -
Gso9g0467 722 PANTHER CASKIN 81 717 - -
Gso9g0467 722 Gene3D - 387 559 IPR036770 -
Gso9g0467 722 PANTHER ANKYRIN REPEAT PROTEIN 81 717 - -
Gso9g0467 722 Pfam Domain of unknown function 562 675 IPR026961 -
Gso9g0467 722 SUPERFAMILY Ankyrin repeat 423 500 IPR036770 -
Gso9g0467 722 SMART ANK_2a 169 198 IPR002110 GO:0005515
Gso9g0467 722 SMART ANK_2a 238 268 IPR002110 GO:0005515
Gso9g0467 722 SMART ANK_2a 453 482 IPR002110 GO:0005515
Gso9g0467 722 SMART ANK_2a 204 233 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0467 Gso-Chr9 4812020 4816980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0467 414 694 Miscellaneous Gene Families AT3G12360 25.000 4.46e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0467 - - gmx:100814269 1414.82