Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0402 ATGCCTCCCGTACCAATTTCCCCCATCAAAGTTGGGCACATTGATGATGTCCAAGAGCTAAGAAAAACCAAGCCAAGGACAATTCCTCAAAGATTTGTACGAGACTTGACAGAAAGACCAACACTCACTACACCTCTTCCCCCACCACATAGTGACATGCCAGTCATTGATTTCTCTAAGCTTAGCAAAGGGAACAAAGAGGAAGTCCTCACTGAACTTTTCAATCTTGCAACTGCTTGTGAAGAGTGGGGATTTTTTCAGGTAATTAATCATGAAATTGACCTCAATCTGCTGGAGAGCATCGAGAACCTGAGCAGGGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATACCCTATGGCTCCAGGAACAGTCCAAGGGTATGGACAAGCTTTTGTTTTCTCAGAGGACCAAAAACTGGACTGGTGCAACATGTTTGCTCTTGGAATTGAACCTCAATATGTTAGGAACCCAAATCTATGGCCAAAGAAACCAGAAAAATTCAGCGAAACTGTGGAAGAATACTCAGGAGAAATAAGGAAACTCTGCTATAATCTGTTAACATACATAGCTTTAGGCCTTGGTTTGAAAGGGGATGAGTTTGAGGAGATGTTTGGCGTATCGGTGCAAGCCGTGAGGATGAACTACTACCCTCCATGTTCAAGACCTGACCTTGTTTTGGGTCTGAGTCCCCATTCAGATGGAAGTGCCCTCACTGTTCTGCAGCAAGCAAAGGGAGGCCCAGTGGGACTTCAGATACTCAAGGACAATACATGGGTTCCTATTCAACCAATTCCAAATGCTCTTGTCATCAACATTGGAGACACAATAGAAGTTCTTACAAATGGGAAATACAGGAGTGTGGAGCATAGAGCTGTGGCTCATGAGGAGAAAGCTAGACTCTCAATTGTGACATTTTTTGCTCCTAGCTATGAAGTGGAGCTTGGTCCAATGCCTGAGTTTGTGGATGAAAACCACCCATGCAAGTATAAAATATACAATCATGGAGAGTACAGTAAACACTATGTAACAAACAAGTTACAAGGTAAAAAGACCCTGGAATTTGCCAAGATCCAAACCAAGAACACAAACTAG 1098 0.4299 MPPVPISPIKVGHIDDVQELRKTKPRTIPQRFVRDLTERPTLTTPLPPPHSDMPVIDFSKLSKGNKEEVLTELFNLATACEEWGFFQVINHEIDLNLLESIENLSREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPQYVRNPNLWPKKPEKFSETVEEYSGEIRKLCYNLLTYIALGLGLKGDEFEEMFGVSVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQAKGGPVGLQILKDNTWVPIQPIPNALVINIGDTIEVLTNGKYRSVEHRAVAHEEKARLSIVTFFAPSYEVELGPMPEFVDENHPCKYKIYNHGEYSKHYVTNKLQGKKTLEFAKIQTKNTN* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0402 365 Gene3D - 12 351 IPR027443 -
Gso9g0402 365 Pfam 2OG-Fe(II) oxygenase superfamily 211 309 IPR044861 -
Gso9g0402 365 PANTHER PROTEIN SRG1 10 362 - -
Gso9g0402 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 310 IPR005123 -
Gso9g0402 365 SUPERFAMILY Clavaminate synthase-like 16 351 - -
Gso9g0402 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 164 IPR026992 -
Gso9g0402 365 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0402 Gso-Chr9 3926590 3928756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0402 52 359 Glycosyltransferase AT5G59530 35.938 1.00e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0402 - - gmx:100820290 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1267 15 12898790 12900791 Gso9g0402 9 3926590 3928756 GST