Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0387 ATGCTGGAGTGCTGCCTTGGAACACGGCGCGTCCGGCAGATTCATCGCGCCTGCCGCCACAGCACCGTGACCTTCCTCTGCCTCTTCCTCACGCTGGTCGTCCTCCGCGGCACCATCGGCGCCGGCAAGTTCGGCACGCCGGAGCAGGACTTCAATGAGATCCGTCACCACCTCTCCGCCGCCCGCGCCCGCCGCGTCCTCGAAGAAGTCAAACCCGAATCCCTATCCTCCTCCGAATCCAACAACTACGCGACCTTCGATCTCTCCAAGATCCTCGTCGACGAGCCCCCCACCGACGACGAAAAACCTAACCCTAACGCGCCCTACACCCTCGGCCCCAAAATCTCAAATTGGGACGAACAACGCTCTTCATGGCTATCCAACAACCCGGACTACCCCAACTTCATCGGACCCAACAAACCCCGCGTCCTCCTCGTAACCGGTTCGTCTCCCAAACCGTGCGAAAACCCGGTCGGAGACCACTACCTTGTCAAATCGATAAAGAACAAGATTGACTACTGCAGGGTCCACGGGATTGAGATTTTCTACAACATGGCTCTCTTGGACGCGGAAATGGCAGGGTTTTGGGCCAAGCTTCCGTTGATTCGGAAGCTCTTGCTTTCTCACCCTGAAGTGGAGTTTCTCTGGTGGATGGACAGTGATGCAATGTTCACCGACATGGCCTTTGAGGTGCCATGGGAGAGGTATAAAGATTCGAACTTTGTTATGCACGGGTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGGTTGAACACTGGTAGTTTTCTGTTGAGAAACTGTCAATGGTCTTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCCAAGGGGAAGATAAGAGATGAAGCTGGGAAAGTGCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGACGATCAATCTGCTATGGTTTATTTGTTGGCAACTGGGAAGGAGAAATGGGGTGACAAGGTTTACCTTGAGAATCACTACTACTTGCATGGTTATTGGGGGATTTTGGTGGATCGTTATGAGGAGATGATTGAGAATTATCACCCGGGGCTTGGTGATCATAGGTGGCCTTTGGTGACTCACTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCTGTTGAGAGGTGCTTGAAGCAGATGGATAGGGCCTATAACTTTGGGGATAACCAGATTTTGCAGATGTATGGATTCACTCATAAGTCACTTGGTAGCCGTAAGGTGAAGAGGGTGAGGAATGATACTAGCAATCCTCTTGAGGTTAAGGATGAGCTTGGATTGCTTCATCCTGCTTTCAAAGCTATCAAGCTCTCTTCTTCTTGA 1353 0.5137 MLECCLGTRRVRQIHRACRHSTVTFLCLFLTLVVLRGTIGAGKFGTPEQDFNEIRHHLSAARARRVLEEVKPESLSSSESNNYATFDLSKILVDEPPTDDEKPNPNAPYTLGPKISNWDEQRSSWLSNNPDYPNFIGPNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEAGKVLTRELKNRPVFEADDQSAMVYLLATGKEKWGDKVYLENHYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHKSLGSRKVKRVRNDTSNPLEVKDELGLLHPAFKAIKLSSS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0387 450 MobiDBLite consensus disorder prediction 94 113 - -
Gso9g0387 450 PANTHER - 4 450 - -
Gso9g0387 450 Pfam galactosyl transferase GMA12/MNN10 family 140 379 IPR008630 GO:0016021|GO:0016757
Gso9g0387 450 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 139 324 IPR029044 -
Gso9g0387 450 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 450 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0387 Gso-Chr9 3779760 3782281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0387 1 450 Glycosyltransferase AT4G02500 79.826 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0387 K08238 - gmx:100813899 947.962