Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0380 ATGACGGAAATGGAGGAAACGGTGTCTCGCGTAATCTCCGAGCTAGAGGATCTCCGTGGAAACCCTCAACCACCACCACTCTCCGAACAAACCCTAACGAATCTTCTATTTCTCCTCAAACACTCTCTTTCAGAGTTTCTCTACGATGAGCTTTCATCGAAGAATCTCTCTCCGTCTTCTCTCATTCCTCCCATTGCTTCCGCAATGGACTCTTCCCCTCCGCACCACTCTCTTCTCGCTTCCGATGTCTTCCTCTCGCTTCTCCTCGCTCCGAACGCACCCGTTTTTACACTCTTTACACCAATGTCGTTTCTTTCCTTCCTCCGCTCCCTCCGCCGCTCCTGCAAGGCCCACTCCCACCCTGGCCCGGCCCAAGACAACTCGCAGAATGGCAAACGAAAGCGCCCGGGTCGCGGTCGCGCGAAAAATCCCCAAAACGAGGACGATTCGCCCGACACTAGTTCCCAACACGACCCCAGGGTGCTCCTCCGCGTGCTGGAGAAGCTAGTCGAAGTGATGGGTTTAATCCACCTCAACCGCTTCCCCGAGACTCTGAAGTCGCTGATCCAAACCGTGGCTGAAATCCCCGTGACCTCGCTCAACACGTGCGGGAACGCGGCGGTGTATAGCAGACTGCTTAGCCTCTGCTCGCACGTGCTGAAGGAAGTTCTCAAATCCGAGCACGGTGAACCTTCCAACACTGCTGCGGAGGTTTTGAAATCGCTGTGTTCGCTTGTTCTCATGGCGAAGTCGCAGGCGAGGACTTTTGCGCTCGGATTTGTCACGAGTCTTGGTAATCAATGTGATGATGTGAAAAAGGCGCTGGTTAATTTTCCGAGGTATTTGGCGAAGAAGGCGCCGGAGAAGGCCGAGCCGAGAGCATTGGCTGTGGAGTCCATCATGGAGGTTGTTAAAGTGATGGGTTTTGATGATCAAATTGCGTTTGTGAAGTATGTTGTGCAGATGGCTCAGGGGAAGTCCAGTCTTCGGCTTTTGGCGGTTGATCTCATTTTGAATCTGGTGATGTCGTTGAAGGATCCGTTGGGCGTGGAGAGTGAAGAGAGTGAGGTGTGGGGGATTTGGTGCTTGGAGGTGCTGTTGAAAAGGTGTTCTGATGTGAGTGGCACGATTCGGGCGAGGGCTTTATCGAATTTGGCCCAGCTGGTGGGGTTTTTGTCTCGCGGTGAGAGGACTAGTGTGGTTCTGAAGGAGTTTATGGGGTTTGGAAAGGTTGGTGATGGGAATGTTGAAGGTGGAATGAATGACATGCTGAGGAGAAGGTGTATGGATGATAAGGCAGCTGTGAGGAAAGCTGCATTGCTTTTGGTTACTAACTTGACTTCTCTTCTTGGAGGCGCCATTGATGAAGTGGTGCTCAAGACAATGGGGATGGCTTGTTCGGATCCACTTATCAGTATGCGGAAAGCGGCAATTACAGCTCTATCGGAGGCTTTCAGAACATTCTCTGCTGAAACAGTAATAACTGAGTGGCTACATTCAGTTCCGCGTTTAATATCTGACAATGAATCAAGCATCCAAGAAGAATGTGAGAACATGTTTAAAGAACTTGTTTTGGACCGGATAATTAGAGCTGCAACTGCTACCTCTTCATATAGCGAGCCTTTGTCTAATAGAAAGATGAAAGGAAAAGGTTTAGACAATGAGATGGAGATGTTTTTTCCCAATGGAACTCTGTATCTTCTGAGAGAGATTTACCATGGGGAGGTGAGCCCTTGGGTGAAGAAAATTTGCACAAATCTGGGCAAAAAGAATCGTATAAATCACAAAATTGTTACCGCACTTCAAAATATAATCAGGGTGTCAGAGTCTATCTGGCTGAGTCACTCCATGCCAATAGAAAAATGGACTGCCCCGCCAGGTGCTTGGTTTCTTTTGTCAGAGGTGTCAACATTCCTTTCAAAAGTAGTAGACTGGGAGTTTCTTCATCATCATTGGCAACTTCTTGACAAACATGAAGTGGAAGGTGAGTTCAAAAGCCCATTTGTACAAAGAAATGCATCTGAAGAGGAAGAAAGCATAGAATGCAATCATGTTGCCTGGGCCAGTGACCGAGTTTTCCTCTTACAAACAATTTCTAATGTTTCTGTGGAGCTGCCCCCTGTACCCGCAGCTGATTTGGCTCATAACTTGCTCAAACGGGTTGAACAATTCAACATGCATTCAACAGAGGTTGATGCTCATTTAAAAGCACTAAAAACATTATGCAAGAGGAAAGCTTCAAATCTCGAAGAGGCAGAAGCATTAGTCTTGAAATGGGTCCACCAAGTTCTCTCCAGGGCTTCTGGAATAATAGAAAAATTCATTTCAGAGAATTCAGAACAAAACGCAGAAGGTAGCTTCTTCACTCCACCTAGAAGTGGGACTAGCAAAGGCAGGAAATCAGTAGCAAAGTCCAAGTCATTGTCTAAAGCAGTAACAGCGATTTATACAGTTGGGTCGGTAGTTATTGTTTGCCCATCTGCTGATATGAGCAATTTAGTTCCTCTGTTGCATACAATCATCACTTCTGGGAGTTCTGGTCCTAAATTAAATAACCTACCCAGCCCTTCAACTTCTTTGCAACAGGAAGCTCCCTCTTTTTATATTCAAGGGTGGCTAGCTATGGGCAAGCTTTGCCTTGCTGATGGGAAGCTAGCTAAGAATTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGAGCAAATCTGCAGCTCTTCGCAACAACATTGTGGTCATGATGGCAGACTTTTGTGTCCGGTTCACTGCTCTTGTTGATTGTTACATAACAAAGATCACAAGGTGTCTCTTAGATCCCTGTGAACTTGTGAGAAGGCAAACGTTCATATTGCTTTCCAGATTGCTGCAGAGGGACTATGTGAAATGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTTGTTGATGAATCAGAAAATATAAGGCAGTTAGCGGATTTTCTCTTTGGAAATATTTTGAAAGTCAAGTCTCCTCTTTTAGCATACAATAGTTTTGTTGAGGCTGTTTTTGTTCTGAACGACTGTCATGTCCATAATGGGCATCGTGAGTCTCAAGGATCACGAAAGGAAAGCCAAATCTTTTCCATCAGGGGTACTGATGAAGAGTCAAGGTCTAAAAGAATGCACATTTATGTTTCTTTGCTAAAACAAATGGCCCCTGAACATCTTCTAGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCCGCAGCTTCTGATGGTATGCTCAATATAGAAGATGCAACTGGACAGTCTGTTCTACAGGATGCTTTTCAAATTCTCGGCTGTAAAGAGATACGCATTTCATCCACTCGTGCATCATCCGAGTCAGCAGATGTAGAGGAGGAAGGGGGAGAAAGTGGATCTGCAGCTAGAGGAAAGACTATAACTCAGGCAGTCAAGAAGGGTCTTATCCAAAATACAGTCCCCATCTTCATAGAGTTGAAACGTTTATTGGAAACCAAGAATAGTCCTCTCATAGGTTCTCTCATGGAGTGCCTCCGCATTATTCTAAAGGACTATAAGAATGAGATTGATGACATATTGGTAGCTGATAAGCAGCTGCAGAAAGAGCTTATTTATGATATTAAAAAATATGAAGCAGCAAAAGCTAAAGCAACAGTAGCTGAGGCTGTGGGCACCAAACCAAAATCAGTTTCAAATCAATCACCTGATGCTTCTAAGAATCTGACCAAGACACAAGGACAAACAGTTGGACAAAGCAGTAATGAGCTTCCAAGTGATTCAAGAGTTGCTTCAGCAATGGCAAATGCAGCAGCTGCAGCAACAGCCCGTTCTGTGCTCAGGGAAATAAACAAGGGGACCGCTACACCATCACTTAGTTCTTTGAGTGTTCCTAAAGTCAAGTCTTGTACTGGTATGTGTCATTCCAAAGATAAGCGCATGGATGTCATACAATCTATAAGGAAAAGACAGTCTTTCGATTCTGATGAAGAAAACTAA 3981 0.4529 MTEMEETVSRVISELEDLRGNPQPPPLSEQTLTNLLFLLKHSLSEFLYDELSSKNLSPSSLIPPIASAMDSSPPHHSLLASDVFLSLLLAPNAPVFTLFTPMSFLSFLRSLRRSCKAHSHPGPAQDNSQNGKRKRPGRGRAKNPQNEDDSPDTSSQHDPRVLLRVLEKLVEVMGLIHLNRFPETLKSLIQTVAEIPVTSLNTCGNAAVYSRLLSLCSHVLKEVLKSEHGEPSNTAAEVLKSLCSLVLMAKSQARTFALGFVTSLGNQCDDVKKALVNFPRYLAKKAPEKAEPRALAVESIMEVVKVMGFDDQIAFVKYVVQMAQGKSSLRLLAVDLILNLVMSLKDPLGVESEESEVWGIWCLEVLLKRCSDVSGTIRARALSNLAQLVGFLSRGERTSVVLKEFMGFGKVGDGNVEGGMNDMLRRRCMDDKAAVRKAALLLVTNLTSLLGGAIDEVVLKTMGMACSDPLISMRKAAITALSEAFRTFSAETVITEWLHSVPRLISDNESSIQEECENMFKELVLDRIIRAATATSSYSEPLSNRKMKGKGLDNEMEMFFPNGTLYLLREIYHGEVSPWVKKICTNLGKKNRINHKIVTALQNIIRVSESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKVVDWEFLHHHWQLLDKHEVEGEFKSPFVQRNASEEEESIECNHVAWASDRVFLLQTISNVSVELPPVPAADLAHNLLKRVEQFNMHSTEVDAHLKALKTLCKRKASNLEEAEALVLKWVHQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTSKGRKSVAKSKSLSKAVTAIYTVGSVVIVCPSADMSNLVPLLHTIITSGSSGPKLNNLPSPSTSLQQEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKSKSAALRNNIVVMMADFCVRFTALVDCYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESENIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHVHNGHRESQGSRKESQIFSIRGTDEESRSKRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDAFQILGCKEIRISSTRASSESADVEEEGGESGSAARGKTITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIKKYEAAKAKATVAEAVGTKPKSVSNQSPDASKNLTKTQGQTVGQSSNELPSDSRVASAMANAAAAATARSVLREINKGTATPSLSSLSVPKVKSCTGMCHSKDKRMDVIQSIRKRQSFDSDEEN* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0380 1326 MobiDBLite consensus disorder prediction 1216 1258 - -
Gso9g0380 1326 Coils Coil 1 21 - -
Gso9g0380 1326 Gene3D - 362 527 IPR011989 -
Gso9g0380 1326 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 5 1312 - -
Gso9g0380 1326 MobiDBLite consensus disorder prediction 782 802 - -
Gso9g0380 1326 MobiDBLite consensus disorder prediction 1282 1326 - -
Gso9g0380 1326 Coils Coil 1177 1197 - -
Gso9g0380 1326 SUPERFAMILY ARM repeat 293 1182 IPR016024 -
Gso9g0380 1326 PANTHER CONDENSIN 5 1312 IPR026971 GO:0007076
Gso9g0380 1326 MobiDBLite consensus disorder prediction 116 158 - -
Gso9g0380 1326 MobiDBLite consensus disorder prediction 1299 1326 - -
Gso9g0380 1326 Coils Coil 735 755 - -
Gso9g0380 1326 MobiDBLite consensus disorder prediction 1220 1256 - -
Gso9g0380 1326 MobiDBLite consensus disorder prediction 140 158 - -
Gso9g0380 1326 Pfam non-SMC mitotic condensation complex subunit 1 905 1082 IPR032682 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0380 Gso-Chr9 3704083 3711798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0380 K11491 - gmx:100793666 2427.9