Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0378 ATGTTAGACCTCAAATACATGTGGGTGCTTGTTTCAATCAACAGGTTCATTCAAGACACCTTGGAAGATGAGAAAACCAGGAATGGTCTAAAATTAAGATGCACCTCCAAGTTGAGGATTCAGAAGCAGGAATTCTTTGAATTCTCTGAGCAATCAGTGTTGTCCAATCTCTACTGGGGCATTGACAGCATTGAAGCTGCAATTCAAGCTAAACAGCCAGAAGAAAGAACCTTCAGGCTAAGGAACTCAGAACAAATGCTTCAGGTGCCAGCAATGCTTGATGAGGAAGAGGTCACCGCCACAATTCCGAACCGTTACTTGGTGTGCTGCTCTTACTTTTACCTCTCAGTGGTTAGGAAGCTCCAGGGAGATGAGTGGCAGGCAGTACTGCATTTTCTTCAAGCAGTTTTGGTCTCACCAAAACTTGTTTGGACAGAATTTGCATCACAACTTTGTGAAAGTCTTTTCCCACAATCAAGCATCACCATGATGCAGAGAAACAGTAGCACTAGAAGTTTGGAATCGGTGTCTTCTGAGGATGAAATGGATGAAGCAATTAGGGAGGTGGCAAGGAGGTACAAGGAGTGCCTTGTGTATTACCAGGTCATGCTTTATGGAGAGACTCCGTGGTGGCGCAGTTATTGCAGCAAACAATCACCACGGTCTGTGGATGTACCAAATACTAGCTGTGTTTCTTCAACTTCAATTCAACACGAACCAAGATTGAAAAGTTGCAATATGTATCACGGCAAAGAGGACCAAACAATTTCAAGCCTCAAATGCTTCAAAGATATGATGATAGAAACACACTCTAAAACACCGGTATCAGGGGATGCATGCTATAAGGATTTTAGAGACAGAAAGGACTTGGAAAATGTGGATGACAGAAAATTTTATATACAAACCACAATAACAAAAGCAGATGATCTACCACCAGAAATCTACAACTGGAAGCTACAACAACACTCTGGTTTGCCTCAAGCTCATCAACATCCAATGCAAGAACAGTTGGACAAAAGAAACATAATTAAGTTTGATTCTAGCAGATTCAACAGGTCTATAGAAGATTTTACCTTATCTATCTCAAAATACAGAGATAAAACAGGAAATACTCTCTTAAATTGCCGTGTAGAGGATGAATTAAATGAGGATGCATCGCAGCCAAAAAAATTGTTTGATCATGTAACATTTACATCTGCTTGCAAACATAGGCCAAGCCAGAAAAATCATGAAGAAAGTTCTGAGATACAAAGATTATATAGCCTAGGAAAGTTTGATGAAGTTTGTTGTTCAAACTCCAGAAGATATTCCCTGCAGGACTTGTCAGAACTGACTGAAAGGAGAATTTCAGAACTACATTATTCAGAGGTATTAGGAAAATGTGATGAAGAATATACTGTAGACATTGCATCAATTTATGAGAGCTTGATTAGTTCATCGGGCGCTACTTATGCTTCCTTAAAGGATGTGATTTTGGATGAGCTGCTAATAGCTATCTCTACTTCCAAAGAAGAAAGAAAAATAAGGGCATCAGTATCTATTCTGACAACAATAATTTCAAGGAACAAGTCAATTATAGAAGACGTCAAGAAGAAAGGTTTAAGGTTGTGTGATCTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATCTATTTAATAAATCCTTCACCTATAGATATAAAAACATTGGAACTTCTGCCAATATTAGTGGAGATTGTATGCACTTCAAATAGTTACAAGAATAAGCAAGAGTCACTTCTTTTGACACCTCATGCAGCATCATTGATGATCATCGAAGAACTAGTAACTTCATTTGACTATGCCACAAATAACATGCATTTGGCCACCATCAGTTCTCCTCATGTTCTCAGCGGATTTTTAGAAGTTGCCAGGAATGATAATCTAGAAGAATTTTTCTCTTTAACTACTATTCTTATAAAATGCATGCAGTATGATGCCCAGTGCAGAAAGTATGTGTCGCAATTTACTCCTCTTGCTCCCTTTATCCACCTTCTGCAATCAGAAAACACACGCGCCAAATGCACAGCTCTTGAATTTTTTCATGAAATCCTTTGCATACCACGATCATCAGCTATTAGTCTGCTGCAGCGTATACAGCAAGAAAGCAGCATCAATATCATGCAGATACTATTGCATTGTGCACATCAGTTACAACCTGATCACCAGCTTTTAGCAGCAAATATTTTGCTTCAGTTAGACATACTGAACTTCCCTGATAAAGGCATCTTCAGAGAAGAAGCAGTGCAGATCCTTCTCAGAGCAATGACATCTGAAGAAAGCTCAGAACAGATATTATCTACATCCATTCTATCGAATCTTGCTGGTACATATGCTTGGACAGGAGAACCATACACAGCTGCATGGTTGCTGAGAAAGACAGGCTTGACCTCTCCCTATCACCAGAATATGATAAGAAACTTCAACTGGCTGGATCAGAGTCTACAGGATACCAGCACAGATTTGTGGTGCAGTAAAATTTCCAAATGTATCATAAGCCATGGGGATTCTGTCTTCCATACTTTAGAGAGGGTGCTAAGAAGCAAGATAAAGAGGGTTTCTAGAGACTGCCTTATAGCCATTTCATGGCTTGGTTTTCAAATATCAAAAAGCCCAGACAGCATAAGTTATTCTGCATCTGAGGTTATACTAAGTGGAATTGAGCAGTTTCTGCATCCTGGGATAGAGTCAGAGGAAAGGCTTCTAGCATGCATGTGCATGTTTAATTATGCCTCTGGGAAAGGAAAGCAAAAACTAATGCATTTCTCAGAAGGAGTAAAGGAATCACTAAGACGCCTTTCAAATGTAATTTGGATGGCTGAGGAATTACACAGAGTAGCCGATTTCTTGCTGCCAAACATATCACGTATTTCTTGTGTTCACACACAAATCCTAGAGGCAGGTTGTGGCTTAAGCTTAGCAGTTTGGTCCCTCATATATTTCAAGGGATTGCTGTTCAGTGGATATTCAGATGGATCAATCAAGGTCTGGGATATTAGGGGGCACTCAGCCAGTCTTGTATGGGACATTAAAGAGCACAAGAAGTCTGTGACATGCTTTTCACTTCATGAGCCGTCAGACAGCCTTTTAAGCGGTTCCACTGATAAAACCATAAGGGTTTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTTATAGCATTGAAGGAACCAATTCATCATTTGCGTGCACATGGTGAAACAATTTTTGCAATTAGCGAAAGCCACGGATTAAAGCTAGTTAATGAATCAAGAGTGACCAAAGATATTTTGAAAGGTAAGCATGTGAAGTGCATGACAGTGGCTCAAGGAAAGTTATATATTGGATGCACAGATTCAAGCATACAGGAGTATTCCACAACACACAACCGTGAACTAGAAATCAAACCCCCAACAAGGAGTTGGAGGAAGCAAAGTAAGCCCATCAATGCAGTAGTAGCATATAGAGACTGGCTCTATAGTGCAAATAAGTATGTTGAAGGCACAACATTCAAGGAATGGAAAAGAACTAAGAAACCAAAAGTTTCAATTTTTACGGACAAAGGAGATAATGTGGCGGCCATGGAAGTGGTAGAAGACTTCTTGTACCTAATCTCCAGCTCTTCACCAAACAACATTCAGATATGGTTGAGGGGGGCACCAAAAAAGTTGGGGAGAATATCAGCAGGAAGCAAGATAACAAGCATCCTCGCAGCCAATGACATCATTTTCTGTGGTACTGAGACGGGACTAATCAAGGGCTGGATCCCTCTGTAG 3789 0.4009 MLDLKYMWVLVSINRFIQDTLEDEKTRNGLKLRCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAKQPEERTFRLRNSEQMLQVPAMLDEEEVTATIPNRYLVCCSYFYLSVVRKLQGDEWQAVLHFLQAVLVSPKLVWTEFASQLCESLFPQSSITMMQRNSSTRSLESVSSEDEMDEAIREVARRYKECLVYYQVMLYGETPWWRSYCSKQSPRSVDVPNTSCVSSTSIQHEPRLKSCNMYHGKEDQTISSLKCFKDMMIETHSKTPVSGDACYKDFRDRKDLENVDDRKFYIQTTITKADDLPPEIYNWKLQQHSGLPQAHQHPMQEQLDKRNIIKFDSSRFNRSIEDFTLSISKYRDKTGNTLLNCRVEDELNEDASQPKKLFDHVTFTSACKHRPSQKNHEESSEIQRLYSLGKFDEVCCSNSRRYSLQDLSELTERRISELHYSEVLGKCDEEYTVDIASIYESLISSSGATYASLKDVILDELLIAISTSKEERKIRASVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSNSYKNKQESLLLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLSGFLEVARNDNLEEFFSLTTILIKCMQYDAQCRKYVSQFTPLAPFIHLLQSENTRAKCTALEFFHEILCIPRSSAISLLQRIQQESSINIMQILLHCAHQLQPDHQLLAANILLQLDILNFPDKGIFREEAVQILLRAMTSEESSEQILSTSILSNLAGTYAWTGEPYTAAWLLRKTGLTSPYHQNMIRNFNWLDQSLQDTSTDLWCSKISKCIISHGDSVFHTLERVLRSKIKRVSRDCLIAISWLGFQISKSPDSISYSASEVILSGIEQFLHPGIESEERLLACMCMFNYASGKGKQKLMHFSEGVKESLRRLSNVIWMAEELHRVADFLLPNISRISCVHTQILEAGCGLSLAVWSLIYFKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSLHEPSDSLLSGSTDKTIRVWKMIQRKLECVEVIALKEPIHHLRAHGETIFAISESHGLKLVNESRVTKDILKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTHNRELEIKPPTRSWRKQSKPINAVVAYRDWLYSANKYVEGTTFKEWKRTKKPKVSIFTDKGDNVAAMEVVEDFLYLISSSSPNNIQIWLRGAPKKLGRISAGSKITSILAANDIIFCGTETGLIKGWIPL* 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0378 1262 SMART WD40_4 1182 1221 IPR001680 GO:0005515
Gso9g0378 1262 SMART WD40_4 1013 1052 IPR001680 GO:0005515
Gso9g0378 1262 SMART WD40_4 968 1008 IPR001680 GO:0005515
Gso9g0378 1262 Pfam WD domain, G-beta repeat 1018 1052 IPR001680 GO:0005515
Gso9g0378 1262 SUPERFAMILY ARM repeat 617 945 IPR016024 -
Gso9g0378 1262 Gene3D - 493 963 IPR011989 -
Gso9g0378 1262 ProSiteProfiles Trp-Asp (WD) repeats profile. 994 1017 IPR001680 GO:0005515
Gso9g0378 1262 SUPERFAMILY WD40 repeat-like 992 1259 IPR036322 GO:0005515
Gso9g0378 1262 Gene3D - 964 1261 IPR015943 GO:0005515
Gso9g0378 1262 ProSiteProfiles Trp-Asp (WD) repeats profile. 1020 1053 IPR001680 GO:0005515
Gso9g0378 1262 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 9 250 - -
Gso9g0378 1262 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 251 1262 - -
Gso9g0378 1262 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1020 1053 - -
Gso9g0378 1262 PANTHER OS04G0584500 PROTEIN 251 1262 - -
Gso9g0378 1262 PANTHER OS04G0584500 PROTEIN 9 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0378 Gso-Chr9 3674109 3684901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0378 - - gmx:100789287 2516.49