Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0376 ATGCCTAAAACCAAACCACTAGCCAAAACAAATCAACTTCAAACTTCTTACAAAATGGAACCTCACAGCCTTTGTTCCTCAGTGGAAACATCGACACAACATATCAACACAATCATAGACCTTATTTCACCTTATCATCATTGTTTCACACTGCTTTTGGTTGCTTCTCTAGCAGCAACCCTTTTCTATGCATGCAGAAGAAAAGCACCAATTTACTTGATAGACTTCACCTGCTACTGTCCACCAAGTTCCTATAGGCTACCACTGGCCATGTTTGAAGAGAATCAACTTTATGACAACATGGATCCTGAGGCTGTTTCTTTCCAATGCAAGATCATGGCCAAATCAGGATTCAGTGAGCAAACATCCATTTCTCCATCTCTTGCTCAGATACCAAAAATAAAAGCTCTCTCCTTTGCCCTTGAGGAAGCTGAAACCATGATGTGTTCAGTAATCAAAGACTTGTTTGAGAAACACAACATCAACCCAAAAGCCATTGACATACTCATCACTAATAGTAGTGTCTTCTGCCCCACACCGTCTCTCAGCGCCATGGTCGTTAACAATTTCAGAATGAGGAGCAACATCATGAGCTTCAACCTATCAGGTATGGGATGCAGTGCTGGAATCATATCAATGAGTCTAGCTAAGGACTTGTTGAGAGTTCATAGGAACTCATTGGCTTTAATAGTAAGCACAGAAACTTTGAGTCTTAATTGGTACACTGGTAAAGTCCCTTCTATGCTGTTATCTAATTGTCTATTCAGAATGGGTGGAGCAGCTATATTGATGTCTAGTAGAGTCCAAGATATGCATAAGGCAAAGTATAAACTTCAGCATATTGTTAGAACAATCACTGCACAGGATGATCAATCTCATGGATGTGTCTACCAACAAGTTGATCCAGAGAACAAGGAAGGTATATCGATCTCAAAGAACATAGTAAATGTGTCTGGAGATGCACTGAAGAAAAACATAGCTTCTCTAGGACCATTGGTTCTGCCTCTGAAGGAGCAATTCTTGTACTTGTTTTCAATTATTCGTAACAAAATTTGGAGTGCAAGGAAGATAAGCATGTACACTCCAAATTTCAACCATGCTTTTGAGCATTTCTGCATACATTCAGGTGGGAGAGCCATCATTCAAGCTGTTGAGAGAAACTTGAGGCTTAGGAAACAGGATGTGGAGCCGTCAACCATGACTCTTTACAGGTTTGGAAACATTTCATCTTCTTCGATTTGGTATGAGCTGAGCTACATAGAAGCAAAAGGGAGGATGAAATGTGGTGATAGGGTGTGGCAAATTGCATTTGGAAGTGGATTCAAGTGTAACAGTGCTGTGTGGAAGTGTGTTTGTGATGTGAAGTCAGACACTGCCACTGCATGGAGGGATACAATTCATTCATACCCTGTGGATATTGTGAGAACAAACTGA 1434 0.4066 MPKTKPLAKTNQLQTSYKMEPHSLCSSVETSTQHINTIIDLISPYHHCFTLLLVASLAATLFYACRRKAPIYLIDFTCYCPPSSYRLPLAMFEENQLYDNMDPEAVSFQCKIMAKSGFSEQTSISPSLAQIPKIKALSFALEEAETMMCSVIKDLFEKHNINPKAIDILITNSSVFCPTPSLSAMVVNNFRMRSNIMSFNLSGMGCSAGIISMSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDMHKAKYKLQHIVRTITAQDDQSHGCVYQQVDPENKEGISISKNIVNVSGDALKKNIASLGPLVLPLKEQFLYLFSIIRNKIWSARKISMYTPNFNHAFEHFCIHSGGRAIIQAVERNLRLRKQDVEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCVCDVKSDTATAWRDTIHSYPVDIVRTN* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0376 477 Gene3D - 91 450 IPR016039 GO:0016746
Gso9g0376 477 PANTHER 3-KETOACYL-COA SYNTHASE 36 474 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso9g0376 477 PIRSF Very_long_ch_3-ktacl-CoA_syn 5 477 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso9g0376 477 SUPERFAMILY Thiolase-like 279 450 IPR016039 GO:0016746
Gso9g0376 477 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 368 449 IPR013747 -
Gso9g0376 477 CDD CHS_like 57 448 - -
Gso9g0376 477 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 36 474 - -
Gso9g0376 477 SUPERFAMILY Thiolase-like 61 267 IPR016039 GO:0016746
Gso9g0376 477 Pfam FAE1/Type III polyketide synthase-like protein 64 350 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0376 Gso-Chr9 3661102 3662906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0376 28 471 Acyl Lipid Metabolism Gene Families AT1G71160 52.561 1.77e-169 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0376 K15397 - gmx:100783404 857.44