Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0363 ATGTCTCCACCCTCTTCACTTCTTCGCTTCTTCACCGTTCCTTTCACCCTGTTTCCACCCTCTTCACTTCTTCGCTTCTTCACCGTTCGTTTCACCGTTCCTTCTTCACTTTGGTGGGATGACAAGGGCACATTCCTGGCCGGTGACACAGCAACCATCAAAGTCAAAGTGCTTGAGAACGCTGATAAGATTGACAGGAAAACTTTCAACCCCACACTAACCGTGAATGGAAAGGAAGGGAACAGTTCCTACGTGTCTACCGTGTTGTCAGATTTCAAAGGAGACCCGAATGAGTGGAAGATTTCCTTCACCCCCATCAGGGTTGGATTGTTTAATGTACTCATCAGCGAGGATCGTTATAAAGTTGATGATTCTTCTTTGCATTTCCAAGTTGAGCCAGGGAACATGTACCCATCTCTATGTGTTGCATCATGGAAGGGTGTGAGACATGAATTTGAAGCTGGTTCAAAAGCAACAATCATGGTACTCCTTAAAGATGCATTTGGGAACAGTATCTCTCAGACGTCTGAAGTGTCTTATTTGCCTGATTTTAAGTTGTATGTGCTGCATGAAAATGGTTCTGTTGCAAGTGCTCCAGATATCTCTAACATAGGGTGGAATGAGTTTGATTATGTAGTCATTGAGTTTGTTGTGACGATAGCGGGAAAGTTCTTCTTGAGCTTAGAAGGAGGAAATCAAACCTTGAATGGTTCTCCATTGCCATTGAAGGTTAATCCAGGAACTATAGATGTCTCTAACTGTATCGCCAAATGGAACATTGAATCACATGCATGGCAATTGGCTTCCAAGATGGAAATATTTATACATCAGTTAGATCAATATGGAAATCTGGTTTCTGGACTGTATCCTTTTGATTCTGAAGTTGTTGAAAGAGATACAAACTTGTCAATACCGATATCAGATCTTCACTTTGAGGAAGTGGATGCTGGAATTCAGTTGTTTTCGTTTAGCAATTTGGAGCCAGGGAACTTCCTGCTGACCATATATGATTCCAAGCATGATAAAAGCATTTCCAATATGCCATATGTTTATACTGTTTTTATTGGTTATTGTGATGGTGTTAAAAGTGTTGTTAATGGATCTGGTTTAAATGATTCAGTAGCTGGTGTAAAGGCAGAATTCTCTGTTTATTTGAATGACATCTATCAATATCCTTCCCCTATTGAAGCAAACATACTTCAAGTACAAATTTTAAGAGAAAATGACTCCTACAGCGCTTCACCAATCATATATCCTATGCTAAACAATAATGGTACTTTCGAAGATAAACTTCTTATCTCACCATGGTTTCAGCCTAATGGGAGCGGGAGCTTTGTCATGGCCAGTGCTTTTCATGTGAAATACATACCAGAAAAAAGTGGCTTTTATGATATTAACATACATTGTGGGAACGTATTATTGAATGAGGGACATTCATTCAGGAAAGAGGTAAAAGCAGGTGAAGTAAATGTTTCCCTGTCAAGTGTTGTGAGGTTTTCTTCAAAGGTGCCAAAGCTGTCGAAAAATGAAATAGTTGTGCAGCTTGTGGATTCATATTTAAATCCTGTCCTCTCACAACAATCAAGGTTGAAATTGGAGATTGCTGCTTCTACCAATAGTTCAGGCTTTTTAACTTTGGACATTAAGGATAATAAGGATGGATCATACAGCTGCAGCTATATGGCCAAAGATGTTGGCACTTACGAGATTTGTGCTTCCTTTGATGGCAAGCGTTTCTTGTCATGTCCCTTCAGTATCAATGTGTATAGCTGTGAATATTTTCCTAAGGCTAACAATGATACAATATCTATTTGGGAGGATCAGTCCATTGCCCTTGATGCCTTAGCAAATGATTATTTTGCGGGTGATAAAGCAAGTATAGTTGAATTCTCAAAACCAGATCATGGTTCACTTATGCAGAATGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAACGATTCCTTTTGGTATACAATTTCTGATATAAATGGAAATCTTGCTACTGCTTTCATGTACATATCTGTTCTCAATGTTCCACCTCAGTTTGTTTCTGTTCCAAATCAACTGCAAGCAACAGAAGATTTGATAAGCCCTAGATTTGGTGGTTTCACCGGGTTTGAGTTAACTTATTCAAATCCAAAGGAGAATATTTCTGTCAATCTTAGTGCACAATCTGGAAGTATACTTCTGTCTCCAGTGGCAATGCAATTTGGGCAAGTAATGTGGAGCAAACTTACATTTTATTCAGGAAATGAAACAACAACCAGTTTAATAATAGAAGGCTCTGTGGAAGTAATTAATTTTGCGCTTCAGTCAATTCAATATCTTGGAAATGAAAATTTTTATGGTGGAGATACCATTCAAGTCTCTGCCAGGAATAAGAATGGGGTGAATTCATTAGGTGTTCCAATATTTGTTGATCCTATTAATGACCCTCCATTTATTAGAGTCCCATACTTCATCATATTGAAGAGTAATGAAGATGAGACCCTTATCTTTGACCAAGAGAAAGACAAGTTTGACTTTTTCATTGGAGATCCCGACCTTCTTACCTTCCCTGGTGGTCAGGCTCATTTTTTTGTGACGTTCTCTATGGAAGTAAATGATGGATTCTTAGTAACAAACCTACCAGTTCATTTGATCAACACAACTGAATTGAAGCACAGATATAATTATCAGTGGCAGCCTCTTCAGACATATGTTACTATCTCAAAGCACTTTATTGTCAAAGCTCATGGAATCAGATTTCTGGGCACAGTCAATGACTGCAATAGTGTTATGCAGCAACTATTCTATCATGGAGGTGAGCGTGGAGCTGTGTTAACATTGACACTAAATGACATGGGGAACTATGGATGTTATCCAGATTGTGCAGAGGGAATGTCAATGCCATTATACACTGAAGCTATAGTTAATTTGATGAGAAAACAGCCAATGAGTTCATTTCTTGCTCACACCTTAGGATCAATCATTGTCATTGAATTTGTCATCATGTCCTCTCTTGGAGTGCTTCTTCTGTACTTCACCTGTAAATGTGCAATTCTTCTTGCACAGGAAAGAAGAAACCGCGAAAAAAGGTCTTCAGAGCTATCTACTTCACAAAGTTCCCACAGAGAAACTGTAAGTGTACAAATATAG 3150 0.3873 MSPPSSLLRFFTVPFTLFPPSSLLRFFTVRFTVPSSLWWDDKGTFLAGDTATIKVKVLENADKIDRKTFNPTLTVNGKEGNSSYVSTVLSDFKGDPNEWKISFTPIRVGLFNVLISEDRYKVDDSSLHFQVEPGNMYPSLCVASWKGVRHEFEAGSKATIMVLLKDAFGNSISQTSEVSYLPDFKLYVLHENGSVASAPDISNIGWNEFDYVVIEFVVTIAGKFFLSLEGGNQTLNGSPLPLKVNPGTIDVSNCIAKWNIESHAWQLASKMEIFIHQLDQYGNLVSGLYPFDSEVVERDTNLSIPISDLHFEEVDAGIQLFSFSNLEPGNFLLTIYDSKHDKSISNMPYVYTVFIGYCDGVKSVVNGSGLNDSVAGVKAEFSVYLNDIYQYPSPIEANILQVQILRENDSYSASPIIYPMLNNNGTFEDKLLISPWFQPNGSGSFVMASAFHVKYIPEKSGFYDINIHCGNVLLNEGHSFRKEVKAGEVNVSLSSVVRFSSKVPKLSKNEIVVQLVDSYLNPVLSQQSRLKLEIAASTNSSGFLTLDIKDNKDGSYSCSYMAKDVGTYEICASFDGKRFLSCPFSINVYSCEYFPKANNDTISIWEDQSIALDALANDYFAGDKASIVEFSKPDHGSLMQNGRIFRYTPYKGYYGNDSFWYTISDINGNLATAFMYISVLNVPPQFVSVPNQLQATEDLISPRFGGFTGFELTYSNPKENISVNLSAQSGSILLSPVAMQFGQVMWSKLTFYSGNETTTSLIIEGSVEVINFALQSIQYLGNENFYGGDTIQVSARNKNGVNSLGVPIFVDPINDPPFIRVPYFIILKSNEDETLIFDQEKDKFDFFIGDPDLLTFPGGQAHFFVTFSMEVNDGFLVTNLPVHLINTTELKHRYNYQWQPLQTYVTISKHFIVKAHGIRFLGTVNDCNSVMQQLFYHGGERGAVLTLTLNDMGNYGCYPDCAEGMSMPLYTEAIVNLMRKQPMSSFLAHTLGSIIVIEFVIMSSLGVLLLYFTCKCAILLAQERRNREKRSSELSTSQSSHRETVSVQI* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0363 1049 PANTHER JITTERBUG, ISOFORM N 33 136 IPR044801 GO:0030036|GO:0051015
Gso9g0363 1049 PANTHER JITTERBUG, ISOFORM N 187 986 IPR044801 GO:0030036|GO:0051015
Gso9g0363 1049 Pfam Bacterial Ig domain 586 668 - -
Gso9g0363 1049 Gene3D Immunoglobulins 135 253 IPR013783 -
Gso9g0363 1049 Gene3D Immunoglobulins 506 593 IPR013783 -
Gso9g0363 1049 MobiDBLite consensus disorder prediction 1029 1049 - -
Gso9g0363 1049 SUPERFAMILY E set domains 137 254 IPR014756 -
Gso9g0363 1049 Pfam Filamin/ABP280 repeat 507 584 IPR017868 -
Gso9g0363 1049 Pfam Filamin/ABP280 repeat 357 471 IPR017868 -
Gso9g0363 1049 SUPERFAMILY E set domains 340 472 IPR014756 -
Gso9g0363 1049 SUPERFAMILY E set domains 509 590 IPR014756 -
Gso9g0363 1049 ProSiteProfiles Filamin/ABP280 repeat profile. 355 484 IPR017868 -
Gso9g0363 1049 Gene3D - 594 675 - -
Gso9g0363 1049 ProSiteProfiles Filamin/ABP280 repeat profile. 491 588 IPR017868 -
Gso9g0363 1049 Gene3D Immunoglobulins 349 497 IPR013783 -
Gso9g0363 1049 PANTHER JITTERBUG, ISOFORM N 33 136 - -
Gso9g0363 1049 PANTHER JITTERBUG, ISOFORM N 187 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0363 Gso-Chr9 3574209 3585418 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0363 - - gmx:100786794 2112.42