Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0360 ATGACTAAGGGTACCTCGGAACCGGGGGGTAGTGGAAGCGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAATCGAATTGGGAAGTTAACCTCGCCAAGAAACTTGAGGAGTATTTGCTGAAAATCTGTTCCGGCGAGATCACTGGCGAAGAAGAAGGACATAGTCCCGTGAATTTTGCCGAAGCTGCTCTGCTGCTTCAGGGTTCCATGCAGGTGTATAGTCGGAAGGTGGAATATCTCTACACCTTGGTCTTGCGTGCTTTGGAGTTTCTTTCTCAGAAAAGAAATCAGGATCATATAGATGGGGCATCAGTCCAACCTGAAGAAAGTGGTCCCCGTGCAGTTACCGATGAAGAAAATGATCAATTCTGGGGCTTGGATGACATCCCAGTTGAAGAAAAGAATTCCTTGGATGCTACAACAGGCAAAGTGAATTTAGATCACTTTATTAAACCTCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGGGAATTGGAGTCTTTTCTGTTGTCCACCACAGACCTGTACCAGGACTTTATTTTATTGGACACATCTGATGCTATTGCAGTTCATGAGTTTTTGAAGAGCAGCAAAGCTGCCACAACTCAAAATGATGCTAATAGAGGAACCTCAGCTCGTAAAAGCTTTCTTTCTCCAGGACATACTGGTGGAAGTGCTCGTAGATTATCAGCTGCTAAGAGTCAGGGTGCTAATAACTGCTCCCCTAAACTTAATTGTGGCTTTAATGATGAAAATGTCCGGTCCAGTTCTCCTGCTTCTGCTGGTCTTGATGACTTCAATTATGGATTTGATATGGATCATGGATGTGATGCATCTAGGGATTCAGACAATTCAGACGAAGATAATGATGATCCATGGAAACCTTTAAATCCTCATGAACCAGGCAACTTAAGGGTGAAGCCATTCAGAAAAGTGAACACTTTAAAAAAGAATAGCATCAATGTCAGACTACCAGTTTCTATGAACACCTTGTTTCCGCTTGCAAAATTGCGTGGTCCTATCAGTCCAGAGCTCATGGAAATGTGGGAGATGCGGCATCTTGTCCATGAACGACAAAGGGATTCTCAAGCTCCATTATATGAGAAGCTGAGGCAATCTCTTGTTAATGAGGGGAATGAAACTGGTGGAACATTTTTTAACTCTGAAGCTGAGAATGATGACAATGAATATGATGGTGGAAATCCTGATTTTGATATGCCGGACAATGCTTACATGGAAGAAGATCTACCATCTTTCAGTAATGAGCATGAATTTGATGATGCTCATGTCAACCCTGATGAAGCTGTGGATCTTTCTCAGACTAGTTTGGAAGATCTTTGCCGCTCTCACCTGAATGCTCTCTTAGCAAGCATTGCTGAAACTGAGAAGCAAACTGAAATGGCTACAAGGGTTTCAGCGTGGAAACAAAAAATTGAGGACAACCTGGAAGAACAGGACTTGCATCCACCATTTGATATCCAAGACTATGGTGAGAGGATTCTTGACAAGTTCTCCCTGCTTTCCCTTGAAGCAAGCAGTAGTGGTGTCCTATCCTTTTCTGATTTAGTGAAGGGTCAAAACAAGTATGATGTGGCTCGAAGTTTTTCTTCCCTTCTTCAACTGGTAAACAATGGAGATGTAGCTCTAGAGAGAAATGGAGTTGATGGGTCTGTCTGCTACTCATCCGTTAATCCCTTTCATGTTAAGCTCCTTAAGCAAAACAGTAAGGAACGGGAGGGTGTGCAGCTTCGTTTGCCAAAAAAGAGAGCAAAGTCTCCAACAAAAAATCCCTCCACACAAGGTGACAAGAACAAAACTGTAAGAAAAAAGTCTCCCTCGTCTTCTAGACATGGATCAACCGGGGTGTCACCACCAACAAATTGTAAGTTTTCTGTAAAGCTTGGAAAGGTGAGTGGCATGAAGTCCCCCGAAGCCAAAAGAAGGCGTAGATCTCAGTATGTTGAACCAGTTAATTTACATTCAACAGGGTGA 2022 0.4357 MTKGTSEPGGSGSGGFHAVHAERDLESNWEVNLAKKLEEYLLKICSGEITGEEEGHSPVNFAEAALLLQGSMQVYSRKVEYLYTLVLRALEFLSQKRNQDHIDGASVQPEESGPRAVTDEENDQFWGLDDIPVEEKNSLDATTGKVNLDHFIKPPANLVVLEGDCLDAGGDGGELESFLLSTTDLYQDFILLDTSDAIAVHEFLKSSKAATTQNDANRGTSARKSFLSPGHTGGSARRLSAAKSQGANNCSPKLNCGFNDENVRSSSPASAGLDDFNYGFDMDHGCDASRDSDNSDEDNDDPWKPLNPHEPGNLRVKPFRKVNTLKKNSINVRLPVSMNTLFPLAKLRGPISPELMEMWEMRHLVHERQRDSQAPLYEKLRQSLVNEGNETGGTFFNSEAENDDNEYDGGNPDFDMPDNAYMEEDLPSFSNEHEFDDAHVNPDEAVDLSQTSLEDLCRSHLNALLASIAETEKQTEMATRVSAWKQKIEDNLEEQDLHPPFDIQDYGERILDKFSLLSLEASSSGVLSFSDLVKGQNKYDVARSFSSLLQLVNNGDVALERNGVDGSVCYSSVNPFHVKLLKQNSKEREGVQLRLPKKRAKSPTKNPSTQGDKNKTVRKKSPSSSRHGSTGVSPPTNCKFSVKLGKVSGMKSPEAKRRRRSQYVEPVNLHSTG* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0360 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Gso9g0360 673 MobiDBLite consensus disorder prediction 238 254 - -
Gso9g0360 673 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 6 661 IPR031739 GO:0030261
Gso9g0360 673 MobiDBLite consensus disorder prediction 585 673 - -
Gso9g0360 673 MobiDBLite consensus disorder prediction 210 228 - -
Gso9g0360 673 MobiDBLite consensus disorder prediction 650 664 - -
Gso9g0360 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 302 586 IPR031737 -
Gso9g0360 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 153 279 IPR031719 -
Gso9g0360 673 MobiDBLite consensus disorder prediction 287 317 - -
Gso9g0360 673 MobiDBLite consensus disorder prediction 388 417 - -
Gso9g0360 673 MobiDBLite consensus disorder prediction 287 305 - -
Gso9g0360 673 MobiDBLite consensus disorder prediction 623 637 - -
Gso9g0360 673 MobiDBLite consensus disorder prediction 210 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0360 Gso-Chr9 3540269 3546729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0360 K11490 - gmx:100785753 1335.09