Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0357 ATGGCGAGGAACACAGCAGACCTCGCAACGAACTTCAATGTTGCTCACCACTTCCCCCACGACTCTCTGCTCCGCTATTGCTCTTCCCACGTTTCTGGCTTCCCTCATCCCCCAACTCACTTCACCGTTTCCCAGTTTGGGCATGGACAATCCAACCCCACGTACTTGTTGGAAGTAGGTTCATATGGTTCCGTGGTGAAGCGCTATGTTCTCAGGAAGAAGCCTCCGGGGAAATTGCTTGCTTCAGCTCATGCCGTCGACAGAGAGTTTCAGGTTTTCTCTTTTTACATTGTTCTCCATGCATTGGGCACTCATACCAAAGTTCCGGTTCCCAAAGTTTTTTGTCTGTGCAATGATCCAACTGTTATTGGAACTGCGTTTTATATCATGGAATATTTGGAGGGGCGCATATTTCTTGACCCCAAGTTACCAGGTGTTACATCTCAAAAGAGGAGGGCAATTTACAGGGCAACAGCTAAAGCCTTAGCTTCCTTACATTCTGCTAATGTAGATTCCATTGGTCTGGGAAATTACGGGCGACGCAATGATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTTGCCTCAACCAGTGAGGGTAAACCTGCAAGTAATCCAAAAATGTTTGCCCTTATTGATTGGCTACGGAATCAAATCCCTCCTGAAGATTCTTCGGGAGCAACAGGAGGTCTGGTTCACGGAGATTTCCGCATTGACAACCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATACTTGACTGGGAATTGTCTACCCTTGGTAACCAAATGTGTGATGTTGCATATAGCTGTATGCCTTATATTGCAGATATTGGACCTGAAAAAGTACATGAAGGTATAGAGCATTTTGGATTACCTGAGGGAATCCCTTCATTACCAGAATATTTGGCTGATTACTGCTCTTTGGCACGAAGAAAATGGCCTGTTGCTGAATGGAAGTTCTATGTTGCCTTTTCTTTCTTCCGGGCAGCTTCAATTTATGCAGGAGTGTATAATAGATGGGTTAAGGGTAATGCATCGGGCGGTGAACGTGCTCGACACACAGAAGTACTTACAAATGGCCTTATAGATACTGCTTGGAAATTTATTGAACACAAATCTGTGCTTCCTCAGCATCCACCCTCAGATGCAAACGCTCAAGACTATTCCAAAGAGTTACCGAATGGGAATGATATACAGGAACTCTCAAATCAGGAGAAGTTTGTTCCTAATCAAAAGGTTTTGGTGCTGAGGAACAAATTAATTAAGTTCATGGAGGAACATATTTACCCCATGGAAAATGAATTTTATAAACTTGCTCAATCAGACTCACGTTGGACTGTTCACCCAGTAGAGGAAAAGTTAAAGGAAATGGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCTGTGAGAGCAAGAAATCTTCTCTTTGATGGGAGCAATAATTATCACTCTAGTGATGCAAATGACTTGCTATTAGGGGCTGGTCTCACAAATCTCGAATATGGATACCTTTGTGAGATCATGGGTCGTTCTCTTTGGGCTCCACAAGTGTTTAACTGTGGTGCACCTGACACAGGTAATATGGAGGTATTACTGCGCTATGGAAATAAAGAGCAACTACAAGAATGGCTAATTCCTTTGCTTGAGGGGACAATTAGGTCTGGATTTGCAATGACAGAACCACATGTTGCATCTTCCGATGCAACCAATATTGAGTGTTCTATCAAAAGGCAAGGAGATTCGTATATTATCAATGGGACAAAATGGTGGACAAGCGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTCATGGGGAAAACTGACTTCAACGCTGCGAAGCATAAACAACAATCTATGATCTTAGTGGATGTCAAGACTCCTGGCATCCACATAAAGAGACCATTGACAGTGTTTGGCTTTGATGATGCTCCGCATGGGCATGCAGAAATAACATTTGAAAATGTTTGTGTGCCCGCAAAAAACATCATACTTGGCGAAGGACGTGGATTTGAGATTGCCCAAGGTAGGCTTGGTCCTGGAAGGCTCCACCATTGTATGAGACTGATAGGTGTTGCTGAGCGAGGCATGCATATGATGGTTCAAAGAGCTGTTAGCAGAAGAACATTTGGGAAGTTGATTGCTCAACATGGTTCATTTATTTCAGATATGGCCAAGTGCCGGATAGAGCTAGAGAGCACCAGATTGTTAGTGTTGGAAGCAGCTGACCAACTTGACAGGCATGGCAACAAAAAAGCTCGAGGGATATTAGCAATGGCGAAGGTAGCCACACCGAACATGGCACTGAAGGTGCTTGACATGGCGATACAAGTGCATGGAGCAGCTGGTGTATCATCTGACACAGTCCTGGCACATCTCTGGGCAGCTTCAAGGACTCTGAGAATTGCGGACGGTCCAGATGAAGTTCACTTGGGGACCATAGCCAAGTTAGAACTACAGAAAGCCAAGCTTTGA 2505 0.4415 MARNTADLATNFNVAHHFPHDSLLRYCSSHVSGFPHPPTHFTVSQFGHGQSNPTYLLEVGSYGSVVKRYVLRKKPPGKLLASAHAVDREFQVFSFYIVLHALGTHTKVPVPKVFCLCNDPTVIGTAFYIMEYLEGRIFLDPKLPGVTSQKRRAIYRATAKALASLHSANVDSIGLGNYGRRNDYCKRQIERWAKQYVASTSEGKPASNPKMFALIDWLRNQIPPEDSSGATGGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMPYIADIGPEKVHEGIEHFGLPEGIPSLPEYLADYCSLARRKWPVAEWKFYVAFSFFRAASIYAGVYNRWVKGNASGGERARHTEVLTNGLIDTAWKFIEHKSVLPQHPPSDANAQDYSKELPNGNDIQELSNQEKFVPNQKVLVLRNKLIKFMEEHIYPMENEFYKLAQSDSRWTVHPVEEKLKEMAKKEGLWNLWIPLDSAVRARNLLFDGSNNYHSSDANDLLLGAGLTNLEYGYLCEIMGRSLWAPQVFNCGAPDTGNMEVLLRYGNKEQLQEWLIPLLEGTIRSGFAMTEPHVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDVKTPGIHIKRPLTVFGFDDAPHGHAEITFENVCVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMHMMVQRAVSRRTFGKLIAQHGSFISDMAKCRIELESTRLLVLEAADQLDRHGNKKARGILAMAKVATPNMALKVLDMAIQVHGAAGVSSDTVLAHLWAASRTLRIADGPDEVHLGTIAKLELQKAKL* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0357 834 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 834 - -
Gso9g0357 834 SUPERFAMILY Protein kinase-like (PK-like) 38 349 IPR011009 -
Gso9g0357 834 Gene3D - 679 833 - -
Gso9g0357 834 Gene3D - 135 378 - -
Gso9g0357 834 Pfam Phosphotransferase enzyme family 43 295 IPR002575 -
Gso9g0357 834 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 412 691 IPR009100 GO:0016627
Gso9g0357 834 Pfam Acyl-CoA dehydrogenase, C-terminal domain 678 826 IPR009075 GO:0016627
Gso9g0357 834 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 676 830 IPR036250 GO:0016627
Gso9g0357 834 CDD ACAD10_11_N-like 42 314 IPR041726 -
Gso9g0357 834 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 834 - -
Gso9g0357 834 Pfam Acyl-CoA dehydrogenase, N-terminal domain 421 560 IPR013786 GO:0016627|GO:0050660
Gso9g0357 834 Gene3D - 414 562 IPR037069 GO:0016627|GO:0050660
Gso9g0357 834 Gene3D Phosphorylase Kinase; domain 1 20 134 - -
Gso9g0357 834 Pfam Acyl-CoA dehydrogenase, middle domain 565 666 IPR006091 GO:0016627
Gso9g0357 834 Gene3D - 564 678 IPR046373 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0357 Gso-Chr9 3519780 3527466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0357 1 832 Acyl Lipid Metabolism Gene Families AT3G06810 75.120 0.0 1296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0357 K00249 - gmx:100778771 1689.47