Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0317 ATGCCTTCTCTCTTCGCTAGAAACCAGAGGTTCTCATTGGCTACTTTCCTGCTTCTGTTGGAACTATTGATAGGATACCTTCGCATGGCAGATGCTCAAATTGGTGTTTGTTATGGTATGATGGGCAACAATCTACCACCGGCAAATGAAGTGATAGATCTTTACAGATCAAATAACATAAGGAGAATGAGACTATATGATCCTAATGAAGCCGCTTTACAAGCACTTAGAAATTCTGGCATTGAACTCATTCTTGGGGTGCCCAACTCAGACCTTCAAGGCCTTGCCACCAACGTTGACACTGCTCGTCAATGGGTGCAAAGAAATGTGTTGAACTTCTGGCCTAGTGTCAAAATCAAGTACGTAGCAGTTGGCAATGAAGTGAATCCAGTTGGAGGATCCTCTTGGCAAGCTCAATATGTTTTACCTGCCGTCCAAAACGTGTACCAAGCTATAAGGGCTCAAGGCCTTCATGATCAAATCAAGGTTACAACAGTTATTGACACGACCCTAATAGGAAACTCCTTCCCTCCATCACAAGGCTCCTTTAGGGGTGATGTGAGATCATACCTAGACCCCATAATTGGATACTTATTATATGCTGGGGCTCCTTTATTAGTCAATATTTACCCTTATTTTAGTTACTCTGGTAATCCCCGTGACATATCACTTCCCTATGCCCTTTTCACCTCACCAAATGTTATGGTATGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATATTGGATTCGGTGCATGCTGCCATTGATAACACAAGGATTGGTTATGTGGAGGTTGTTGTATCTGAGAGTGGCTGGCCCTCAGATGGAGGGTTTGGTGCCACTTATGACAACGCACGTGTGTATTTAGAAAATTTGGTTCGTCGTTCTAGTAGAGGTAGCCCACGACGGCCTTCAAAGCCCACAGAGACTTATATATTTGCCTTGTTTGATGAGAATAACAAGAGTCCAGAGATAGAGAAACATTTTGGGTTGTTCAATCCCAACAAACAAAAGAAGTACCCATTTGGATTTGGTACAAAAAGGAATGAGAAAGTTGTTATTGATGACTTCAATGCAACAATTTCCCTCAAGAGTGACATGTAA 1113 0.4214 MPSLFARNQRFSLATFLLLLELLIGYLRMADAQIGVCYGMMGNNLPPANEVIDLYRSNNIRRMRLYDPNEAALQALRNSGIELILGVPNSDLQGLATNVDTARQWVQRNVLNFWPSVKIKYVAVGNEVNPVGGSSWQAQYVLPAVQNVYQAIRAQGLHDQIKVTTVIDTTLIGNSFPPSQGSFRGDVRSYLDPIIGYLLYAGAPLLVNIYPYFSYSGNPRDISLPYALFTSPNVMVWDGQYGYQNLFDAILDSVHAAIDNTRIGYVEVVVSESGWPSDGGFGATYDNARVYLENLVRRSSRGSPRRPSKPTETYIFALFDENNKSPEIEKHFGLFNPNKQKKYPFGFGTKRNEKVVIDDFNATISLKSDM* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0317 370 Gene3D Glycosidases 33 348 - -
Gso9g0317 370 Pfam Glycosyl hydrolases family 17 34 345 IPR000490 GO:0004553|GO:0005975
Gso9g0317 370 SUPERFAMILY (Trans)glycosidases 34 346 IPR017853 -
Gso9g0317 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 354 IPR044965 GO:0004553|GO:0005975
Gso9g0317 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 22 354 - -
Gso9g0317 370 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0317 Gso-Chr9 3037494 3044267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0317 40 356 Glycoside Hydrolase AT4G16260 61.755 9.79e-142 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0317 - - gmx:100783593 704.516