Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2749 ATGGGGAAAAGAAAAGAGCGTCGTCGCCTCGCCGCTATCAGCAACGCCGGTCGCAGAGTCAAACTCGATCTTTTCGCGGAACCCTCTGGAGAGTTGGGTGGCTCCACTCTACAAGGTGATGCTGGAGGAGATACTGATTCTCAACATCGTGATGGGTTACCCAATTCACCCTCTTCTTCAGGTCAACAACCACAGAATCCCCTGCTGTTACTTGGGCAATATAGTGATGATGAAGGGGATGATGGATCAAGCAAAGGGCTTAATGATGCAAATGTGCAAAGCCCCATGCTTAATGAAGAGGCTAAGGGTATATTTGATGAAGGATCCAAAGATTTGGACATCAGTGTCCCAGTAGATCTTGTTGCTCAGAATAATGGACAGCAAAATACAATACAAAATTCTACTTCACTTGATGTTGGGTACAGTGAAAGAAATGAAAGTGATGGTGCTGCTGGTAATTTGCAAAATGAAATCGTTTCCAAAGATCAAATATATGTTTCTGAAAGTTTTGATGAACAAGTTCTCACTGATGTTGGTTTGGGATGGAAGATGGTGATGCACGAGGAAAGTCAACGCTATTATTACTGGAACATTGAAACTGGGGAAACTTCATGGGAAGTGCCTCAGGTCCTGGCTCATGAAGATCAGTTGGCTAATGACTCAATACCTCATGCTTCTGTCAATGATAAAACAGAGAGTGCTGCTGTTGGTGATAATTCCAATGTGCACTCGGCTGTGTTGCAGGACACTTCTGCTGCTTTCATAATCGATGGTTCATTGGAAACCACAGTGACTTCTCATAAAGAATTGTATGGTCACAGGTCCCAAATTAATGGAGATAGTGTTGAATGTACAAATCAAAATCAGATTTCTGATGTTAATGGAAATGAATTGACAAGAAATGATGGTCATATGAGTTTATCTGATGAGGGACACCATTCATCTGTTTCCAAGTTTGGTGATGAAGAACAACAGCAATTGGACATTGATTTTCCTTCTCGTCTTGTCAAACAAAGTGAGAGTTTGTTAGAGAGGCTGAAATCACTGAAAAAGTCAAAGGAGAATTTGCTAGGCCAGGACTTCTTGTCAAAGTATATGCTAGAGATTGAGATTAGGCTCTCTGATATTAGGTCTCTTGCATCATATGGATCATCTTTGCTTCCATTCTGGGAGCATTCTGACAGAAAGATAAAATTGCTTGAAAGTTTAATCACCGATGATTTGATGCAAATTGGTAATTCTTCACATGATGAAGTTGAGGATAAACATGTCCCTGTCTCTGAAGAATTGGCTGACCAACTGAATGGCATGGGACATGAGTCAGAGGTAGATAATAATAAGAACGAAGGGAGCCCTCTTACTTCTAATGTTTCTAATGAATCTCAGGATGATGCTTCGGCTGCAGTTCTAAAAGATATCAACAATAAAATTTCTGCCAATGGTCAGCATGTTGCATTGTCTAATTCTCCTGGTAGTCACATGGAAACAGATGTAGAAATTAATTCAAAAGTTGAAGCAATTATTAATCCTCAGGAACCAATTCATAAACATGGGTATAACGTTGGGGAAGATGTTGATATGGATGTGGACATGGAAGTTGAAGATATGAATTCCTCAGGCAATACTACTGTCATCGATGTACCTGTTGCAAAGGATTCCATGCACATAGATCAACTGGTTCAGTTGAATCCACCCGTTGACTACCTTTCTGTGTTGCCTGAGGAGGGTGAATTTGTTCCTCCTCCACCAGATGATGAATGGATTCCTCCTCCACCGCCTGATAATGAGCATGTGCCTCCACCACCACCGCCAGACAATGATCAGGTGCCCCCTCCACCTGGTGATCCACTAGCACCTTCTTATAGTGTTCTCCCATCTTACACAGAGACAGGGCAACCCCTTTCTTATGCTCAATATAGTCTATCTTATCCTGGTGTTGCTCCTGAGTATTATGGGCAGGCAGCTGCTGAAGTCCCAAGCAGTAATATATATGGACAAATTGCTATGCCACCTGCTCATATCTACTATAATAGTGCAATTCCTAACATGTATAGTGAAAATCCTCAAGTTATGATCGATCCAGCTGGCACTGTTGCTTATTATGAGGTTCAAGATGGAGCTGTTTCAAAGTCCATTCCCACTATCAATTTTAATGATTCTGGTGTTGGTGGGGCTGACTGGGCATCTAGTGATGGTCCATCTACCTCATCTAGCATCCATGCACCTGCAACTGTTTCAGTTGACGAAGGTGTCTCATTGCCTCCTGCTACTGCCGAATCTGCTGCAGAAAACAATGCATCGTCATTAGTTCCTAAAGCCCAAACAAAAGTTGTACGCAATAGGAAGCGAGCAGTTGCAGTTGGATCCTCATTAAAATCTAATAAGAAGGTTTCAAGTTTAGTAGATAAGTGGAAGGCAGCTAAAGAGGAGTTGCTCGAAGAGGAGGAAGAACCTGATAGTGTGTATGAGGTCTTAGAAAGAAAGCGTCAAAGGGAAATAGAGGAGTGGCATGCCAAGCAAATTGCAAGTGGAGAGGCCAAAGATAATGCTAATTTTCAGCCTCTAGGTGGTGATTGGCGAGAGAAGGTCAAACGCAGGAGAGCACAAGCAGCAAAAGAATCTGTTAGTACACCGCAGGATGCAATTGAGCATAACCAGCAGCAACCTGATCCGAGTGAACACTCAAAGGGTCTCCCAACTAATTGGCAGGCTTACTGGGACGATAGCACAAAGCAGATTTATTATGGTAACACTGTAACGTCGGAGACAACATGGACTAAGCCAACAAGATGA 2793 0.425 MGKRKERRRLAAISNAGRRVKLDLFAEPSGELGGSTLQGDAGGDTDSQHRDGLPNSPSSSGQQPQNPLLLLGQYSDDEGDDGSSKGLNDANVQSPMLNEEAKGIFDEGSKDLDISVPVDLVAQNNGQQNTIQNSTSLDVGYSERNESDGAAGNLQNEIVSKDQIYVSESFDEQVLTDVGLGWKMVMHEESQRYYYWNIETGETSWEVPQVLAHEDQLANDSIPHASVNDKTESAAVGDNSNVHSAVLQDTSAAFIIDGSLETTVTSHKELYGHRSQINGDSVECTNQNQISDVNGNELTRNDGHMSLSDEGHHSSVSKFGDEEQQQLDIDFPSRLVKQSESLLERLKSLKKSKENLLGQDFLSKYMLEIEIRLSDIRSLASYGSSLLPFWEHSDRKIKLLESLITDDLMQIGNSSHDEVEDKHVPVSEELADQLNGMGHESEVDNNKNEGSPLTSNVSNESQDDASAAVLKDINNKISANGQHVALSNSPGSHMETDVEINSKVEAIINPQEPIHKHGYNVGEDVDMDVDMEVEDMNSSGNTTVIDVPVAKDSMHIDQLVQLNPPVDYLSVLPEEGEFVPPPPDDEWIPPPPPDNEHVPPPPPPDNDQVPPPPGDPLAPSYSVLPSYTETGQPLSYAQYSLSYPGVAPEYYGQAAAEVPSSNIYGQIAMPPAHIYYNSAIPNMYSENPQVMIDPAGTVAYYEVQDGAVSKSIPTINFNDSGVGGADWASSDGPSTSSSIHAPATVSVDEGVSLPPATAESAAENNASSLVPKAQTKVVRNRKRAVAVGSSLKSNKKVSSLVDKWKAAKEELLEEEEEPDSVYEVLERKRQREIEEWHAKQIASGEAKDNANFQPLGGDWREKVKRRRAQAAKESVSTPQDAIEHNQQQPDPSEHSKGLPTNWQAYWDDSTKQIYYGNTVTSETTWTKPTR* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2749 930 Coils Coil 336 359 - -
Gso8g2749 930 MobiDBLite consensus disorder prediction 447 461 - -
Gso8g2749 930 ProSitePatterns WW/rsp5/WWP domain signature. 902 928 IPR001202 GO:0005515
Gso8g2749 930 Gene3D - 176 219 - -
Gso8g2749 930 CDD WW 899 929 IPR001202 GO:0005515
Gso8g2749 930 ProSiteProfiles WW/rsp5/WWP domain profile. 896 930 IPR001202 GO:0005515
Gso8g2749 930 MobiDBLite consensus disorder prediction 437 461 - -
Gso8g2749 930 SUPERFAMILY WW domain 172 211 IPR036020 GO:0005515
Gso8g2749 930 Coils Coil 794 814 - -
Gso8g2749 930 MobiDBLite consensus disorder prediction 49 70 - -
Gso8g2749 930 ProSitePatterns WW/rsp5/WWP domain signature. 182 208 IPR001202 GO:0005515
Gso8g2749 930 MobiDBLite consensus disorder prediction 872 902 - -
Gso8g2749 930 Gene3D - 892 930 - -
Gso8g2749 930 ProSiteProfiles WW/rsp5/WWP domain profile. 176 210 IPR001202 GO:0005515
Gso8g2749 930 SMART ww_5 177 210 IPR001202 GO:0005515
Gso8g2749 930 SMART ww_5 897 930 IPR001202 GO:0005515
Gso8g2749 930 MobiDBLite consensus disorder prediction 303 320 - -
Gso8g2749 930 PANTHER OS06G0298400 PROTEIN 1 929 - -
Gso8g2749 930 SUPERFAMILY WW domain 896 929 IPR036020 GO:0005515
Gso8g2749 930 MobiDBLite consensus disorder prediction 576 619 - -
Gso8g2749 930 Pfam WW domain 898 928 IPR001202 GO:0005515
Gso8g2749 930 Pfam WW domain 181 208 IPR001202 GO:0005515
Gso8g2749 930 CDD WW 181 208 IPR001202 GO:0005515
Gso8g2749 930 MobiDBLite consensus disorder prediction 19 93 - -
Gso8g2749 930 MobiDBLite consensus disorder prediction 840 902 - -
Gso8g2749 930 MobiDBLite consensus disorder prediction 292 320 - -
Gso8g2749 930 MobiDBLite consensus disorder prediction 573 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2749 Gso-Chr8 45199840 45207079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2749 K24774 - gmx:100791890 1658.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2749 8 45199840 45207079 Gso8g2749 8 45199840 45207079 ECH