Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2744 ATGTCTTCGTCGTCGTCGTCGTCGGAAGATGAATCTATGTCGGAACAGAGCAATGAATTAGGACTTGATTTCATCTTGAGCTTGGACAATATTCCATCAAAGCTCCCTCCACACCTCGAACTCTTTAAAACACGTGTTCTTTGCAACAACGATGCTCCTGTGCACACTGATACTGTTCAATATTCCGGTGCCTATGCTATTATGGGAGTTGATAATAGTGTGCGGTTGGATAGCTTCTGTGAAAACTTTAAGGTTGAAGTGAAGCGGCTGACGGATAGCGATATTGAATTTGATATGATTGGAATCGATCCGGCAATTGCCAATGCATTTCGAAGAATCCTTATAGCAGAGGTTCCAACAATGGCTATTGAAAGAGTATATATCGCAAACAATACATCGGTTGTACAAGATGAAGTTCTTTCCCATAGATTGGGTCTCATTCCAATTCGTGCTGATCCCAGGTTATTTGAATATCCAGAAAATGCAGGAGATGACAAAAATGAAAAGAACACCATTGTCTTCAAGCTACATGTTCGTTGTCAAGTGGGTCAACCTCGTATTACTGTGAAATCAGATAAACTGAAGTGGTTACCTAATGGGAGTGAGCTTCCCTGTGAAGATGTCAAACCAAATGCAGGTTCAAAACCAAAAACATTTACATCTTTTACTTGCAGCCAAGATTCACTTCCTGAATTTTCCAACAATTCTATTGGTCTTACATATTCGGATATTATACTGGCTAAACTTGGACCTGGTCAGGAAATTGAACTTGAAGCGCATGCAGTTAAAGGCACTGGAAAGACACATGCAAAATGGTCCCCAGTTGCCACCACTTGGTATCGGATGCTTCCAGAGGTTGTACTCTTGAAAGATGTTGAGGATGAGCTGGCTGAAGAATTAAAAAACAAGTGTCCAGTTAATGTGTTTGATATTGAAGACATTGGAAAAGGTAAAAGAAGGGCAAAAGTAGCCAGACCACGGGATTGCACTTTGTGTAGGGAATGCATCAGAGGGGGCAAAGAATGGGAAGATCGTGTATCATTACGCCGTGTTAAAAATCATTTCATTTTTACTATTGAATCAACTGGAGCATTACCCCCTGAAGTGCTGTTTACTGAAGCTGTGAAGATTTTGGAAGATAAATGTGAACGTGTGATTACTGAGCTTTCTTGA 1173 0.4066 MSSSSSSSEDESMSEQSNELGLDFILSLDNIPSKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELPCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2744 390 Hamap DNA-directed RNA polymerase subunit Rpo3 [rpo3]. 84 389 IPR022842 GO:0003899|GO:0006351
Gso8g2744 390 SUPERFAMILY RBP11-like subunits of RNA polymerase 81 389 IPR036603 GO:0006351|GO:0046983
Gso8g2744 390 PANTHER BNAA01G22480D PROTEIN 23 390 - -
Gso8g2744 390 Pfam RNA polymerase Rpb3/Rpb11 dimerisation domain 96 382 IPR011263 GO:0003899|GO:0006351
Gso8g2744 390 Pfam RNA polymerase Rpb3/RpoA insert domain 126 273 IPR011262 GO:0003899|GO:0006351|GO:0046983
Gso8g2744 390 Gene3D - 85 381 IPR036603 GO:0006351|GO:0046983
Gso8g2744 390 SMART rpoldneu2 94 388 IPR011263 GO:0003899|GO:0006351
Gso8g2744 390 ProSitePatterns RNA polymerases D / 30 to 40 Kd subunits signature. 108 148 IPR001514 GO:0003677|GO:0003899|GO:0006351
Gso8g2744 390 Gene3D - 120 270 IPR036643 -
Gso8g2744 390 PANTHER DNA-DIRECTED RNA POLYMERASE 23 390 - -
Gso8g2744 390 CDD RNAP_I_II_AC40 83 388 IPR033901 GO:0001054|GO:0001056
Gso8g2744 390 SUPERFAMILY Insert subdomain of RNA polymerase alpha subunit 119 274 IPR036643 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2744 Gso-Chr8 45149706 45154489 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2744 K03027 - gmx:100818494 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2744 8 45149706 45154489 Gso8g2744 8 45149706 45154489 ECH