Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2681 ATGACTCTCTCTCGTGTACTTGCTATACTCATTCTTCAGTACTCATTGGTAGCACTGGTTTCTTCAGCTGGACCACCAAGTGGCTGGAAAACATTGCAAGGATCTCCACCAATGGTCATAGCACGTGGTGGGTTTTCAGGGATATTTCCAGATTCAAGTTCACTTGCCTATGGTTTGGCACTTGATACTTGTGGTCCAAATGTGACTCTATGGTGTGATGTGCAATTGACAAAGGATGGAGTTGGGATCTGTTTCCCAGAGCTCAAGCTAGACAATGCCACTGACATTTCCATTGCTTACCCAGGCAAGGCAAAGGATTACTTAGTTAATGGGGTCTCAACCCGGGGATGGTTTTCAGTGGATTACAACTTTGGTGAACTAGCAAATGTCTCTGTTGTCCAGGGAGTGTACTCTCGGACTAATAAGTTTGATGGCAACAAGCTTCCCATTCTCACTGTTGAACAAGTAGTTAAATTAATAAAATCACCATCTACAGGCCTGTGGTTAAATTTTCAGCATGCTTCATTCTTCAAGCAACAGAATTTGAGTGTAGAAAATTTTCTTCAATCTCTCCCTGGTAGAAGTGTACCGGTCAATTACATCTCATCACCTGATGTGGACTTCTTAAGAAGAGTAAAATCAAGCTTTAGTTCTGGACCAACTAGCTTCATCTTCAGGATTCTGGAGCAGTCTAAGATTGAACCTACAACCAATCAGACATATGGTGAACTCTTGAAAAATCTTGCACTTATCAAGACATTTTCTTCAGGAATTCTTGTTCCCAAGGGCTATATATGGCCTGTAGACTCAGATCATTATCTACAACCACATACCCCTCTTGTCACAGATGCTCATAGAGAAGGGCTGCAAGTTTTTGTATCAGACCTTACTAATGATGTTCCATTTAGCTACAATTTCAGCTATGATCCTCTGGCTGAGTGTCTATCTTTCATCGACGGTGATGATTTTTCTGTTGATGGTGTGCTGTCAGACTTCCCAGTAACTCCATCTGCAGCCATAAATTGCTTTTCTGGTCTAGGGGAAAATGCAAAAAGACAAGTGGACACTTTGGTTATCACAAAATATGGAGCAAGTGGAGACAATCCTGCGTGTACTGACCTTGCATACAACCAAGCTAAATCAGATGGGGCAGATGTACTTGACTGTCCTGTTCAAATGTCCAAGGATGGAATACCCTTTTGCTTAAGCTCTATTGATTTATTAGAGAGCACAACAGTTGCTGATACACAATTCAAAAACCGTGCAACAACTATTCTGGAGATTAAATTTCGCAGTGGCATATATACATTCAGCTTGACATGGGATGAGATAAAAACATTGACACCCTCAATATTGAACCCTTATGAGAAATACATATTGTCCCGGAATCCAAAATCCAAAAATCTAGGAAAACTTATAACCTTGTCTGACTTTTTGTCCTTGAACGAAGGCTCTCACATCTTGATCAGCATAGAGAATGCTGCCTATCTTGCTGAGAAGCAGAATTTACATGTGACCGATGCAGTCCTTGATGCATTACAAAAAGCAAAACCAAGATCACATAAAGTTATGATTCAGTCAACTCATAGCTCTGTGCTGAAGATATTCAAAGATAAATCCAAATTTGAAAGGGTTTACAAGGTTGATGAGAACATTCGCGACGCGGCTGACTCAGCCATTGAGGACATCAAAACATTTGCTGATTCTGTGGTTATAGGAAAGGCATCTGTTTTTCCTGAAAGTTCAGCCTTTCTAGTTAACTCTACAAACACTGTGGCAAGGCTAAAATCATTTAAGCTCCCAGTTTATGTAGAAACTTTTAGCAATGAATTTGTATCACAAGCATGGGACTACTACTCAGATCCATCCATTGAGATAAATTCATTTGTCATTGGAACCAAGGTTAATGGCATTATTACTGACTTCCCAAAGACAGCAAATAGATATAGAAGGAACTTGTGTTTAAAGAATGGCAACAAAGAACCTTACAGGAGCCCTATTGAACCTGGCAAACTTTTTAAACAAATTTCTAACTTGTACCTTCCACCACTTCCCCCTCCACTCCCAGTCTTGACTGATAGTAATGTGACAGAGGCACCTTTGCCTGGTGTCTCTGGAAAAGTTCCATCTAGCAAAGCTGCTCCTGGAGTAGGAGCAGCAGCTCCAGCCCCCATCACAGCATAA 2184 0.4089 MTLSRVLAILILQYSLVALVSSAGPPSGWKTLQGSPPMVIARGGFSGIFPDSSSLAYGLALDTCGPNVTLWCDVQLTKDGVGICFPELKLDNATDISIAYPGKAKDYLVNGVSTRGWFSVDYNFGELANVSVVQGVYSRTNKFDGNKLPILTVEQVVKLIKSPSTGLWLNFQHASFFKQQNLSVENFLQSLPGRSVPVNYISSPDVDFLRRVKSSFSSGPTSFIFRILEQSKIEPTTNQTYGELLKNLALIKTFSSGILVPKGYIWPVDSDHYLQPHTPLVTDAHREGLQVFVSDLTNDVPFSYNFSYDPLAECLSFIDGDDFSVDGVLSDFPVTPSAAINCFSGLGENAKRQVDTLVITKYGASGDNPACTDLAYNQAKSDGADVLDCPVQMSKDGIPFCLSSIDLLESTTVADTQFKNRATTILEIKFRSGIYTFSLTWDEIKTLTPSILNPYEKYILSRNPKSKNLGKLITLSDFLSLNEGSHILISIENAAYLAEKQNLHVTDAVLDALQKAKPRSHKVMIQSTHSSVLKIFKDKSKFERVYKVDENIRDAADSAIEDIKTFADSVVIGKASVFPESSAFLVNSTNTVARLKSFKLPVYVETFSNEFVSQAWDYYSDPSIEINSFVIGTKVNGIITDFPKTANRYRRNLCLKNGNKEPYRSPIEPGKLFKQISNLYLPPLPPPLPVLTDSNVTEAPLPGVSGKVPSSKAAPGVGAAAPAPITA* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2681 727 MobiDBLite consensus disorder prediction 702 727 - -
Gso8g2681 727 ProSiteProfiles GP-PDE domain profile. 356 650 IPR030395 GO:0006629|GO:0008081
Gso8g2681 727 CDD GDPD_SHV3_repeat_1 37 339 - -
Gso8g2681 727 SUPERFAMILY PLC-like phosphodiesterases 357 650 IPR017946 GO:0006629|GO:0008081
Gso8g2681 727 CDD GDPD_SHV3_repeat_2 357 649 - -
Gso8g2681 727 Gene3D Phosphatidylinositol (PI) phosphodiesterase 36 339 IPR017946 GO:0006629|GO:0008081
Gso8g2681 727 Gene3D Phosphatidylinositol (PI) phosphodiesterase 355 649 IPR017946 GO:0006629|GO:0008081
Gso8g2681 727 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 1 727 - -
Gso8g2681 727 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 1 727 - -
Gso8g2681 727 Pfam Glycerophosphoryl diester phosphodiesterase family 363 645 IPR030395 GO:0006629|GO:0008081
Gso8g2681 727 Pfam Glycerophosphoryl diester phosphodiesterase family 72 334 IPR030395 GO:0006629|GO:0008081
Gso8g2681 727 ProSiteProfiles GP-PDE domain profile. 37 340 IPR030395 GO:0006629|GO:0008081
Gso8g2681 727 SUPERFAMILY PLC-like phosphodiesterases 36 339 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2681 Gso-Chr8 44470825 44476933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2681 3 723 Receptor kinase-like Gene Family AT4G26690 53.878 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2681 - - gmx:100813869 1406.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2681 8 44470825 44476933 Gso8g2681 8 44470825 44476933 ECH
Gso18g0718 18 8306871 8313520 Gso8g2681 8 44470825 44476933 GST